Cow genome map


           Conread name:
           Ss1.1-rdbla0134_b19.5
        

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               305, 293
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               160, 153
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 220
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               74, 61
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 293
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 316
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 310
               

               Conread position:
               1-509
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               1-509
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 302
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 67
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               325
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 56
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               303
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               179, 149
               

               Conread position:
               1-512
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 34
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 139
               

               Conread position:
               1-520
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               398, 393
               

               Conread position:
               1-520
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 54
               

               Conread position:
               1-520
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               327
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               74, 55
               

               Conread position:
               1-522
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               332
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               136, 129
               

               Conread position:
               1-523
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 315
               

               Conread position:
               2-520
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-520
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               499, 0
               

               Conread position:
               3-399
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               125, 140
               

               Conread position:
               3-471
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               289
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               3-472
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               3-472
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               425, 443
               

               Conread position:
               3-475
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 74
               

               Conread position:
               3-475
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 74
               

               Conread position:
               3-476
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               157, 138
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               3-509
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 220
               

               Conread position:
               3-509
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 314
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               311
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               49, 70
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               317
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               50, 70
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               319
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 73
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               304
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 70
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 314
               

               Conread position:
               4-476
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               4-520
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               327
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               5-402
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               155, 11
               

               Conread position:
               6-325
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               311, 0
               

               Conread position:
               6-472
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               6, 67
               

               Conread position:
               7-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               295, 303
               

               Conread position:
               10-470
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               287
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               158, 129
               

               Conread position:
               10-580
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               228, 6
               

               Conread position:
               13-476
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               296
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               19-482
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               120, 134
               

               Conread position:
               22-483
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               23-470
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 277
               

               Conread position:
               36-509
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 279
               

               Conread position:
               70-470
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               67, 73
               

               Conread position:
               75-509
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 219
               

               Conread position:
               82-471
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               245, 241
               

               Conread position:
               82-520
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               89-474
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-509
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               100-476
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               119-519
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               133-511
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               165-449
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               165-509
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               150, 138
               

               Conread position:
               166-392
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               151, 137
               

               Conread position:
               235-470
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               238-580
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               241-474
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-518
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               264-518
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               331-520
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               136, 0
               
Show alignments to all cow chromosomes.