Cow genome map


           Conread name:
           Ss1.1-rdbla0134_e11.5
        

               Conread position:
               4-382
               

               Cow position:
               chr8:40364769-40364388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               415-547
               

               Cow position:
               chr8:40362465-40362333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               532-626
               

               Cow position:
               chr8:40360859-40360766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               625-741
               

               Cow position:
               chr8:40359255-40359139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               733-847
               

               Cow position:
               chr8:40356366-40356253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               848-912
               

               Cow position:
               chr8:40354938-40354874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               65
               

               Alignm identity:
               65
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               907-1911
               

               Cow position:
               chr8:40354352-40353353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1030
               

               Alignm identity:
               795
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 209
               
Show alignments to all cow chromosomes.