Cow genome map


           Conread name:
           Ss1.1-rebs12c_l2.5
        

               Conread position:
               189-492
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               189-500
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               191-503
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               191-504
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               120, 183
               

               Conread position:
               192-422
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 7
               

               Conread position:
               192-503
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               124, 209
               

               Conread position:
               192-504
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               119, 75
               

               Conread position:
               192-504
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               119, 28
               

               Conread position:
               195-404
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 38
               

               Conread position:
               195-416
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               195-427
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               110, 53
               

               Conread position:
               195-485
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               214, 29
               

               Conread position:
               196-355
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               119, 67
               

               Conread position:
               196-501
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               197-504
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 28
               

               Conread position:
               206-472
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               206-478
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 171
               

               Conread position:
               220-504
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               220-504
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               30, 257
               

               Conread position:
               224-469
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               224-504
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               224-504
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               224-504
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               224-504
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               225-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               225-504
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               228-486
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 196
               

               Conread position:
               230-504
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               89, 276
               

               Conread position:
               231-504
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 167
               

               Conread position:
               232-486
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               234-500
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               235-428
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               235-459
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-477
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-482
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-486
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 141
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 146
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               81, 114
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 162
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               84, 244
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 146
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 160
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               76, 31
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               236-492
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               236-494
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               238-471
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               239-504
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               72, 170
               

               Conread position:
               239-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               63, 178
               

               Conread position:
               255-504
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               256-504
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               173, 21
               

               Conread position:
               278-486
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               294-482
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               317-504
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               319-482
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               319-500
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               319-501
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               319-504
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               319-504
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               321-504
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               321-504
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               163, 90
               
Show alignments to all cow chromosomes.