Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 189-492
Cow position: chr12:47803441-47803119 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 30

Conread position: 189-500
Cow position: chr12:19198306-19197989 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 35

Conread position: 191-503
Cow position: chr12:542150-542479 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 33

Conread position: 191-504
Cow position: chr12:41288600-41288274 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 183

Conread position: 192-422
Cow position: chr12:26823388-26823156 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 7

Conread position: 192-503
Cow position: chr12:42798275-42797948 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 209

Conread position: 192-504
Cow position: chr12:487933-487606 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 119, 75

Conread position: 192-504
Cow position: chr12:23491469-23491795 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 119, 28

Conread position: 195-404
Cow position: chr12:36665726-36665514 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 38

Conread position: 195-416
Cow position: chr12:15823323-15823549 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 78

Conread position: 195-427
Cow position: chr12:35265774-35265541 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 110, 53

Conread position: 195-485
Cow position: chr12:45540406-45540118 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 214, 29

Conread position: 196-355
Cow position: chr12:29427708-29427876 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 119, 67

Conread position: 196-501
Cow position: chr12:20334808-20334493 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 69, 33

Conread position: 196-504
Cow position: chr12:32220362-32220033 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 29, 9

Conread position: 197-504
Cow position: chr12:13259680-13259357 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 28

Conread position: 206-472
Cow position: chr12:23099798-23100074 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 18

Conread position: 206-478
Cow position: chr12:1991721-1991438 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 171

Conread position: 220-504
Cow position: chr12:551575-551878 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 9

Conread position: 220-504
Cow position: chr12:42856291-42856594 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 30, 257

Conread position: 224-469
Cow position: chr12:21303663-21303401 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 95, 13

Conread position: 224-501
Cow position: chr12:23138094-23138389 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 95, 13

Conread position: 224-504
Cow position: chr12:22748450-22748151 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 224-504
Cow position: chr12:31027584-31027884 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 224-504
Cow position: chr12:35161843-35161544 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 224-504
Cow position: chr12:35162999-35162700 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 225-504
Cow position: chr12:14853420-14853704 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 16

Conread position: 225-504
Cow position: chr12:21314194-21314493 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 228-486
Cow position: chr12:1173772-1174053 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 196

Conread position: 230-504
Cow position: chr12:1405678-1405387 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 89, 276

Conread position: 231-504
Cow position: chr12:25097036-25097327 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 167

Conread position: 232-486
Cow position: chr12:23520935-23521207 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 234-500
Cow position: chr12:48416521-48416804 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 59

Conread position: 235-428
Cow position: chr12:29128138-29128342 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 235-459
Cow position: chr12:36287788-36288030 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 235-477
Cow position: chr12:15925527-15925787 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 235-482
Cow position: chr12:5776905-5777170 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-486
Cow position: chr12:9988462-9988732 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 141

Conread position: 235-501
Cow position: chr12:1511539-1511824 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-501
Cow position: chr12:21665360-21665075 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 235-501
Cow position: chr12:27614640-27614355 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:61983-62271 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr12:1007240-1006952 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:1056283-1056571 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:1408042-1407768 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 82

Conread position: 235-504
Cow position: chr12:1491391-1491103 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:1886135-1886415 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 13

Conread position: 235-504
Cow position: chr12:5107282-5106994 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr12:8674841-8675127 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr12:8841834-8842115 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 81, 18

Conread position: 235-504
Cow position: chr12:10358920-10358632 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 146

Conread position: 235-504
Cow position: chr12:11101472-11101185 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 81, 114

Conread position: 235-504
Cow position: chr12:12754932-12755218 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 162

Conread position: 235-504
Cow position: chr12:12928682-12928969 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 84, 244

Conread position: 235-504
Cow position: chr12:14568590-14568878 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 146

Conread position: 235-504
Cow position: chr12:17718525-17718237 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:18585897-18585609 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr12:20459495-20459782 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr12:22202457-22202731 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 44, 57

Conread position: 235-504
Cow position: chr12:22566259-22565974 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 160

Conread position: 235-504
Cow position: chr12:25148394-25148681 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 31

Conread position: 235-504
Cow position: chr12:27929567-27929855 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr12:27958301-27958589 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:27994325-27994037 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 235-504
Cow position: chr12:28763789-28764062 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 43

Conread position: 235-504
Cow position: chr12:32757921-32757633 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:34176589-34176301 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:35547904-35548190 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 235-504
Cow position: chr12:37562231-37561945 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:38893588-38893299 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:39930393-39930105 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr12:42232534-42232246 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr12:42604958-42605239 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 55

Conread position: 235-504
Cow position: chr12:45145277-45144989 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 236-492
Cow position: chr12:19155636-19155912 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 187

Conread position: 236-494
Cow position: chr12:19971973-19971710 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 41

Conread position: 238-471
Cow position: chr12:6441620-6441867 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 239-504
Cow position: chr12:250098-250376 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 72, 170

Conread position: 239-504
Cow position: chr12:8773887-8773602 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 178

Conread position: 255-504
Cow position: chr12:32066764-32066501 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 256-504
Cow position: chr12:3364132-3363880 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 173, 21

Conread position: 278-486
Cow position: chr12:21705698-21705914 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 32, 108

Conread position: 294-482
Cow position: chr12:16439178-16438984 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 110, 18

Conread position: 317-504
Cow position: chr12:536438-536632 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 319-482
Cow position: chr12:35473407-35473576 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 319-500
Cow position: chr12:31329490-31329678 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 319-501
Cow position: chr12:24696674-24696485 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 319-504
Cow position: chr12:42194763-42194571 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 319-504
Cow position: chr12:46163868-46163676 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 321-504
Cow position: chr12:1468998-1469188 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 321-504
Cow position: chr12:21130168-21129987 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 163, 90

Show alignments to all cow chromosomes.