Cow genome map
| Conread name: | Ss1.1-rebs12c_l2.5 |
| Conread position: | 189-500 |
| Cow position: | chr13:34051684-34051362 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 191-482 |
| Cow position: | chr13:41568269-41568575 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 128, 48 |
| Conread position: | 191-486 |
| Cow position: | chr13:25891424-25891123 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 191-504 |
| Cow position: | chr13:60426087-60425762 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 192-399 |
| Cow position: | chr13:45002651-45002870 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 217 |
| Conread position: | 192-420 |
| Cow position: | chr13:24110006-24110240 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 181 |
| Conread position: | 192-435 |
| Cow position: | chr13:19310751-19310990 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 192-486 |
| Cow position: | chr13:26986853-26987164 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 121, 152 |
| Conread position: | 192-501 |
| Cow position: | chr13:488581-488259 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 92, 188 |
| Conread position: | 192-502 |
| Cow position: | chr13:17252895-17253212 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 192-504 |
| Cow position: | chr13:10733036-10732715 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 192-504 |
| Cow position: | chr13:21764397-21764083 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 192-504 |
| Cow position: | chr13:52279873-52279546 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 89 |
| Conread position: | 195-436 |
| Cow position: | chr13:38075137-38075390 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 83 |
| Conread position: | 195-492 |
| Cow position: | chr13:42272195-42271878 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 237 |
| Conread position: | 195-500 |
| Cow position: | chr13:25882286-25881974 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 170 |
| Conread position: | 196-435 |
| Cow position: | chr13:11571618-11571863 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 114, 57 |
| Conread position: | 196-461 |
| Cow position: | chr13:24580033-24580314 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 206 |
| Conread position: | 196-473 |
| Cow position: | chr13:57159082-57158790 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 120, 166 |
| Conread position: | 196-476 |
| Cow position: | chr13:39921278-39921554 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 196-487 |
| Cow position: | chr13:21855397-21855088 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 196-500 |
| Cow position: | chr13:54067949-54067638 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 117, 71 |
| Conread position: | 196-504 |
| Cow position: | chr13:18945479-18945789 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 72 |
| Conread position: | 197-487 |
| Cow position: | chr13:14552573-14552878 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 96, 85 |
| Conread position: | 199-486 |
| Cow position: | chr13:20242832-20242534 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 199-504 |
| Cow position: | chr13:6441892-6441574 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 199-504 |
| Cow position: | chr13:11169102-11169416 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 201-486 |
| Cow position: | chr13:14182900-14183205 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 202-445 |
| Cow position: | chr13:17485639-17485385 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 208-482 |
| Cow position: | chr13:30279965-30279676 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 209-486 |
| Cow position: | chr13:18975678-18975948 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 219-504 |
| Cow position: | chr13:34039309-34039614 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 220-487 |
| Cow position: | chr13:43974920-43975205 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 220-501 |
| Cow position: | chr13:34033185-34032897 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 95 |
| Conread position: | 220-504 |
| Cow position: | chr13:28526280-28526581 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 222-504 |
| Cow position: | chr13:54106859-54107161 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 11, 200 |
| Conread position: | 223-500 |
| Cow position: | chr13:44323932-44324231 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 224-504 |
| Cow position: | chr13:143093-143391 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 224-504 |
| Cow position: | chr13:3556438-3556140 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 224-504 |
| Cow position: | chr13:24237556-24237260 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 224-504 |
| Cow position: | chr13:28131532-28131234 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 229-492 |
| Cow position: | chr13:43120526-43120809 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 230-500 |
| Cow position: | chr13:23266808-23267098 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 85, 151 |
| Conread position: | 234-504 |
| Cow position: | chr13:36347110-36347394 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 235-467 |
| Cow position: | chr13:8781924-8781674 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-486 |
| Cow position: | chr13:57027259-57027005 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 235-492 |
| Cow position: | chr13:3021469-3021745 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-492 |
| Cow position: | chr13:32734171-32734446 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 161 |
| Conread position: | 235-492 |
| Cow position: | chr13:34928172-34927906 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 123, 227 |
| Conread position: | 235-495 |
| Cow position: | chr13:1591140-1591419 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-499 |
| Cow position: | chr13:17496099-17495820 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 235-500 |
| Cow position: | chr13:22907251-22907537 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 235-500 |
| Cow position: | chr13:34905557-34905841 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-500 |
| Cow position: | chr13:41337651-41337937 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 149 |
| Conread position: | 235-501 |
| Cow position: | chr13:6360882-6360598 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 235-501 |
| Cow position: | chr13:17921497-17921787 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 235-501 |
| Cow position: | chr13:31510161-31509878 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 235-501 |
| Cow position: | chr13:42087112-42087397 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-501 |
| Cow position: | chr13:50190055-50190340 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 189 |
| Conread position: | 235-503 |
| Cow position: | chr13:3784145-3783865 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 20 |
| Conread position: | 235-504 |
| Cow position: | chr13:561370-561656 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:681067-680779 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:3651428-3651715 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:3657334-3657622 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:4944406-4944118 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:6665112-6665400 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:6719148-6719436 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:7609161-7608875 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 184 |
| Conread position: | 235-504 |
| Cow position: | chr13:8068186-8068474 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:11390274-11389986 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:13332938-13333226 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:14302970-14303255 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 81, 62 |
| Conread position: | 235-504 |
| Cow position: | chr13:14400060-14400349 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:14411155-14411443 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:15921441-15921729 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:16807613-16807325 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:18121854-18122142 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:18330109-18330397 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:19566737-19566448 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:19638169-19637881 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 81, 241 |
| Conread position: | 235-504 |
| Cow position: | chr13:21837281-21837569 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 141 |
| Conread position: | 235-504 |
| Cow position: | chr13:26204443-26204730 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:28699836-28699550 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 144 |
| Conread position: | 235-504 |
| Cow position: | chr13:29055412-29055700 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 235-504 |
| Cow position: | chr13:30306202-30305914 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:30469102-30469387 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 235-504 |
| Cow position: | chr13:31608426-31608711 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 80, 31 |
| Conread position: | 235-504 |
| Cow position: | chr13:31989890-31989602 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:32080892-32080604 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:32253335-32253623 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 235-504 |
| Cow position: | chr13:32549775-32549488 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 180 |
| Conread position: | 235-504 |
| Cow position: | chr13:32955444-32955732 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 235-504 |
| Cow position: | chr13:32982385-32982673 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 235-504 |
| Cow position: | chr13:33522942-33523226 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 269 |
| Conread position: | 235-504 |
| Cow position: | chr13:34376513-34376800 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 163 |
| Conread position: | 235-504 |
| Cow position: | chr13:36936747-36936460 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 235-504 |
| Cow position: | chr13:38612240-38611952 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:39911421-39911133 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:45933767-45933479 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:53051852-53051564 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 235-504 |
| Cow position: | chr13:53157373-53157661 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:58313348-58313060 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr13:60646570-60646857 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 244 |
| Conread position: | 236-486 |
| Cow position: | chr13:3314642-3314375 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 236-504 |
| Cow position: | chr13:4486868-4486581 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 236-504 |
| Cow position: | chr13:32774336-32774617 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 236-504 |
| Cow position: | chr13:34321965-34322237 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 226 |
| Conread position: | 237-491 |
| Cow position: | chr13:13902870-13902598 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 112 |
| Conread position: | 237-501 |
| Cow position: | chr13:35760556-35760288 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 82, 211 |
| Conread position: | 237-504 |
| Cow position: | chr13:49976684-49976398 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 237-504 |
| Cow position: | chr13:50112480-50112194 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 239-492 |
| Cow position: | chr13:12565150-12565411 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 80, 108 |
| Conread position: | 239-492 |
| Cow position: | chr13:30794703-30794972 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 230 |
| Conread position: | 241-484 |
| Cow position: | chr13:34345314-34345053 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 241-492 |
| Cow position: | chr13:3480883-3481144 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 52, 134 |
| Conread position: | 241-492 |
| Cow position: | chr13:19239910-19239648 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-485 |
| Cow position: | chr13:512780-513026 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 245-504 |
| Cow position: | chr13:9536858-9537125 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 69 |
| Conread position: | 249-480 |
| Cow position: | chr13:33168777-33169014 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 263-465 |
| Cow position: | chr13:42279160-42278934 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 263-504 |
| Cow position: | chr13:35686364-35686107 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 133 |
| Conread position: | 264-500 |
| Cow position: | chr13:42250540-42250796 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 119 |
| Conread position: | 285-482 |
| Cow position: | chr13:4856040-4855837 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 300-504 |
| Cow position: | chr13:31725740-31725948 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 132, 12 |
| Conread position: | 311-482 |
| Cow position: | chr13:5328191-5328015 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 65 |
| Conread position: | 319-491 |
| Cow position: | chr13:14737812-14737632 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 319-501 |
| Cow position: | chr13:19424554-19424360 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 319-504 |
| Cow position: | chr13:28132397-28132205 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 319-504 |
| Cow position: | chr13:30243142-30242950 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 92 |
| Conread position: | 319-504 |
| Cow position: | chr13:34508902-34509094 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 94 |
| Conread position: | 319-504 |
| Cow position: | chr13:47728879-47729070 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 12 |
| Conread position: | 320-485 |
| Cow position: | chr13:512480-512312 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 333-504 |
| Cow position: | chr13:35540078-35539900 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.