Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 189-500
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 35

Conread position: 191-482
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 128, 48

Conread position: 191-486
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 8

Conread position: 191-504
Cow position:
Alignm length: 332
Alignm identity: 216
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 34

Conread position: 192-399
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 217

Conread position: 192-420
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 181

Conread position: 192-435
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 79

Conread position: 192-486
Cow position:
Alignm length: 313
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 152

Conread position: 192-501
Cow position:
Alignm length: 324
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 188

Conread position: 192-502
Cow position:
Alignm length: 328
Alignm identity: 215
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 121, 7

Conread position: 192-504
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 21

Conread position: 192-504
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 42, 7

Conread position: 192-504
Cow position:
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 89

Conread position: 195-436
Cow position:
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 83

Conread position: 195-492
Cow position:
Alignm length: 319
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 237

Conread position: 195-500
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 170

Conread position: 196-435
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 114, 57

Conread position: 196-461
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 206

Conread position: 196-473
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 166

Conread position: 196-476
Cow position:
Alignm length: 290
Alignm identity: 193
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 20

Conread position: 196-487
Cow position:
Alignm length: 312
Alignm identity: 203
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 62

Conread position: 196-500
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 117, 71

Conread position: 196-504
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 72

Conread position: 197-487
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 96, 85

Conread position: 199-486
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 49

Conread position: 199-504
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 25

Conread position: 199-504
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 117, 0

Conread position: 201-486
Cow position:
Alignm length: 306
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 202-445
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 38

Conread position: 208-482
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 30

Conread position: 209-486
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 9

Conread position: 219-504
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 7

Conread position: 220-487
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 220-501
Cow position:
Alignm length: 292
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 95

Conread position: 220-504
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 17

Conread position: 222-504
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 200

Conread position: 223-500
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 224-504
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 92, 14

Conread position: 224-504
Cow position:
Alignm length: 300
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 13

Conread position: 224-504
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 30

Conread position: 224-504
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 89, 13

Conread position: 229-492
Cow position:
Alignm length: 284
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 230-500
Cow position:
Alignm length: 292
Alignm identity: 202
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 85, 151

Conread position: 234-504
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 78, 19

Conread position: 235-467
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-486
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 52

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 161

Conread position: 235-492
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 227

Conread position: 235-495
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 235-499
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 235-500
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 40

Conread position: 235-500
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 235-500
Cow position:
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 149

Conread position: 235-501
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 235-501
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 235-501
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 37

Conread position: 235-501
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-501
Cow position:
Alignm length: 287
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 189

Conread position: 235-503
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 20

Conread position: 235-504
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 80, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 184

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 81, 62

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 81, 241

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 141

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 144

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 42

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 235-504
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 131

Conread position: 235-504
Cow position:
Alignm length: 287
Alignm identity: 204
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 80, 31

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 42

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 180

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 37

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 37

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 269

Conread position: 235-504
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 163

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 84, 50

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 51, 42

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 244

Conread position: 236-486
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 236-504
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 236-504
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 36

Conread position: 236-504
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 226

Conread position: 237-491
Cow position:
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 112

Conread position: 237-501
Cow position:
Alignm length: 271
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 82, 211

Conread position: 237-504
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 237-504
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 239-492
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 80, 108

Conread position: 239-492
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 230

Conread position: 241-484
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 241-492
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 134

Conread position: 241-492
Cow position:
Alignm length: 263
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 242-485
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 52

Conread position: 245-504
Cow position:
Alignm length: 269
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 69

Conread position: 249-480
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 67, 52

Conread position: 263-465
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 263-504
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 133

Conread position: 264-500
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 119

Conread position: 285-482
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 28

Conread position: 300-504
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 12

Conread position: 311-482
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 65

Conread position: 319-491
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 319-501
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 96

Conread position: 319-504
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 319-504
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 92

Conread position: 319-504
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 94

Conread position: 319-504
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 12

Conread position: 320-485
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 333-504
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.