Cow genome map
| Conread name: | Ss1.1-rebs12c_l2.5 |
| Conread position: | 174-504 |
| Cow position: | chr16:48495534-48495882 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 181-494 |
| Cow position: | chr16:10859731-10860060 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 184-504 |
| Cow position: | chr16:35093-34754 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 187-486 |
| Cow position: | chr16:10812653-10812336 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 189-492 |
| Cow position: | chr16:17141991-17141672 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 189-492 |
| Cow position: | chr16:51041135-51040822 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 189-499 |
| Cow position: | chr16:47772852-47772521 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 189-500 |
| Cow position: | chr16:54287126-54286808 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 227 |
| Conread position: | 191-504 |
| Cow position: | chr16:47476559-47476263 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 192-420 |
| Cow position: | chr16:19780567-19780800 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 192-428 |
| Cow position: | chr16:12018351-12018107 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 45 |
| Conread position: | 192-436 |
| Cow position: | chr16:29397606-29397353 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 124, 182 |
| Conread position: | 192-470 |
| Cow position: | chr16:13777493-13777200 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 192-484 |
| Cow position: | chr16:34410775-34411077 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 121, 47 |
| Conread position: | 192-485 |
| Cow position: | chr16:11640511-11640200 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 119, 49 |
| Conread position: | 192-487 |
| Cow position: | chr16:25263186-25262884 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 89, 142 |
| Conread position: | 192-490 |
| Cow position: | chr16:340363-340050 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 195-435 |
| Cow position: | chr16:42176482-42176231 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 195-461 |
| Cow position: | chr16:9226186-9225907 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 195-479 |
| Cow position: | chr16:11309927-11309628 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 195-502 |
| Cow position: | chr16:30052529-30052205 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 195-504 |
| Cow position: | chr16:39757119-39756797 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 195-504 |
| Cow position: | chr16:45816535-45816856 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 80, 51 |
| Conread position: | 196-461 |
| Cow position: | chr16:31504503-31504222 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 117, 81 |
| Conread position: | 196-486 |
| Cow position: | chr16:27010760-27010453 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 156 |
| Conread position: | 196-486 |
| Cow position: | chr16:28473353-28473651 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 196-491 |
| Cow position: | chr16:10569413-10569125 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 196-504 |
| Cow position: | chr16:24925631-24925309 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 198-501 |
| Cow position: | chr16:48909086-48909391 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 157 |
| Conread position: | 199-429 |
| Cow position: | chr16:685028-685251 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 199-501 |
| Cow position: | chr16:8591985-8591669 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 203-498 |
| Cow position: | chr16:16032459-16032150 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 204-504 |
| Cow position: | chr16:6620056-6620370 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 214-482 |
| Cow position: | chr16:15549402-15549129 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 220-492 |
| Cow position: | chr16:3148479-3148764 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 203 |
| Conread position: | 220-504 |
| Cow position: | chr16:7467169-7466868 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 220-504 |
| Cow position: | chr16:26666261-26665958 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 223-496 |
| Cow position: | chr16:20634659-20634952 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 13, 191 |
| Conread position: | 223-501 |
| Cow position: | chr16:21018112-21017816 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 93, 14 |
| Conread position: | 224-504 |
| Cow position: | chr16:26317263-26316965 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 224-504 |
| Cow position: | chr16:29158175-29157896 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 224-504 |
| Cow position: | chr16:41515684-41515386 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 225-500 |
| Cow position: | chr16:55911237-55911527 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 231-504 |
| Cow position: | chr16:12535402-12535684 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 235-427 |
| Cow position: | chr16:5756474-5756276 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-445 |
| Cow position: | chr16:26627294-26627070 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 235-457 |
| Cow position: | chr16:18651040-18651280 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-458 |
| Cow position: | chr16:5435367-5435126 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-459 |
| Cow position: | chr16:50874297-50874540 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 235-470 |
| Cow position: | chr16:20278382-20278129 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-478 |
| Cow position: | chr16:712902-712641 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-482 |
| Cow position: | chr16:40879134-40878869 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-487 |
| Cow position: | chr16:37454939-37455205 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-491 |
| Cow position: | chr16:37486715-37486988 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 235-492 |
| Cow position: | chr16:15349605-15349879 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 271 |
| Conread position: | 235-492 |
| Cow position: | chr16:19887563-19887287 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 235-499 |
| Cow position: | chr16:43562853-43563136 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-499 |
| Cow position: | chr16:43844427-43844697 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 235-500 |
| Cow position: | chr16:23985855-23985570 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-500 |
| Cow position: | chr16:24240858-24241142 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 206 |
| Conread position: | 235-500 |
| Cow position: | chr16:37053580-37053296 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-501 |
| Cow position: | chr16:41076-40792 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 81, 183 |
| Conread position: | 235-501 |
| Cow position: | chr16:658502-658218 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 235-501 |
| Cow position: | chr16:4426633-4426348 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-501 |
| Cow position: | chr16:10440781-10440496 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-501 |
| Cow position: | chr16:10965703-10965977 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 191 |
| Conread position: | 235-501 |
| Cow position: | chr16:28193758-28194043 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 183 |
| Conread position: | 235-501 |
| Cow position: | chr16:53612345-53612062 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 129 |
| Conread position: | 235-503 |
| Cow position: | chr16:49230744-49231026 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 235-504 |
| Cow position: | chr16:417437-417148 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:1734280-1733994 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 81, 256 |
| Conread position: | 235-504 |
| Cow position: | chr16:2408352-2408640 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 235-504 |
| Cow position: | chr16:2480607-2480890 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 69 |
| Conread position: | 235-504 |
| Cow position: | chr16:3011380-3011093 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 183 |
| Conread position: | 235-504 |
| Cow position: | chr16:3769469-3769756 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:5525557-5525850 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:7673919-7674206 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 81, 159 |
| Conread position: | 235-504 |
| Cow position: | chr16:8813561-8813847 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 80, 231 |
| Conread position: | 235-504 |
| Cow position: | chr16:10372892-10373180 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:11633302-11633589 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 81, 232 |
| Conread position: | 235-504 |
| Cow position: | chr16:12651470-12651182 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:13538882-13539170 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 235-504 |
| Cow position: | chr16:14100394-14100108 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 71, 271 |
| Conread position: | 235-504 |
| Cow position: | chr16:15311823-15311537 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 235-504 |
| Cow position: | chr16:15570312-15570023 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 13, 184 |
| Conread position: | 235-504 |
| Cow position: | chr16:15979836-15980123 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 81, 232 |
| Conread position: | 235-504 |
| Cow position: | chr16:16150206-16150493 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:16539951-16539668 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 78, 209 |
| Conread position: | 235-504 |
| Cow position: | chr16:18975410-18975123 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:19081594-19081306 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:21189800-21189512 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 84, 183 |
| Conread position: | 235-504 |
| Cow position: | chr16:23533457-23533743 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 158 |
| Conread position: | 235-504 |
| Cow position: | chr16:23875998-23876275 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 235-504 |
| Cow position: | chr16:24209856-24210143 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 235-504 |
| Cow position: | chr16:24407452-24407164 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 183 |
| Conread position: | 235-504 |
| Cow position: | chr16:24988175-24988463 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:25344521-25344232 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:25444418-25444132 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 235-504 |
| Cow position: | chr16:26388623-26388911 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:26654205-26653924 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 107 |
| Conread position: | 235-504 |
| Cow position: | chr16:27593280-27593568 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:27730839-27731127 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:28206569-28206857 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:28468581-28468869 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:31586158-31586442 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 235-504 |
| Cow position: | chr16:37146519-37146231 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:37478319-37478606 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 235-504 |
| Cow position: | chr16:40293628-40293916 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:42074357-42074638 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 69 |
| Conread position: | 235-504 |
| Cow position: | chr16:42211038-42210750 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:46102075-46102362 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 81, 161 |
| Conread position: | 235-504 |
| Cow position: | chr16:46554964-46554676 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 235-504 |
| Cow position: | chr16:47403924-47403638 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 84, 227 |
| Conread position: | 235-504 |
| Cow position: | chr16:51087325-51087037 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 13 |
| Conread position: | 235-504 |
| Cow position: | chr16:54479748-54479460 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 236-501 |
| Cow position: | chr16:4756565-4756282 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 23 |
| Conread position: | 236-504 |
| Cow position: | chr16:839822-839538 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 80, 155 |
| Conread position: | 236-504 |
| Cow position: | chr16:4972984-4973268 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 236-504 |
| Cow position: | chr16:37925442-37925721 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 236-504 |
| Cow position: | chr16:43894721-43895008 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 237-499 |
| Cow position: | chr16:15179212-15178942 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 237-500 |
| Cow position: | chr16:14662568-14662850 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 237-501 |
| Cow position: | chr16:20643028-20642748 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 237-501 |
| Cow position: | chr16:54179824-54180096 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 120 |
| Conread position: | 237-503 |
| Cow position: | chr16:2394902-2394624 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 76, 138 |
| Conread position: | 237-504 |
| Cow position: | chr16:4343365-4343648 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 238-491 |
| Cow position: | chr16:25260663-25260392 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 238-501 |
| Cow position: | chr16:15812607-15812325 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 239-473 |
| Cow position: | chr16:16993712-16993464 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 183 |
| Conread position: | 239-504 |
| Cow position: | chr16:3819906-3819619 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 158 |
| Conread position: | 239-504 |
| Cow position: | chr16:14352144-14352426 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 227 |
| Conread position: | 239-504 |
| Cow position: | chr16:52526771-52526486 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 241-504 |
| Cow position: | chr16:45655056-45655334 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 72, 120 |
| Conread position: | 242-439 |
| Cow position: | chr16:43987904-43988101 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 242-504 |
| Cow position: | chr16:12160745-12161025 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 225 |
| Conread position: | 247-504 |
| Cow position: | chr16:6945790-6945514 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 252-504 |
| Cow position: | chr16:27105881-27105614 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 255-504 |
| Cow position: | chr16:49529926-49529658 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 256-493 |
| Cow position: | chr16:4398757-4398514 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 267-504 |
| Cow position: | chr16:17111763-17111506 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 294-461 |
| Cow position: | chr16:5056996-5057166 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 18 |
| Conread position: | 306-486 |
| Cow position: | chr16:43647240-43647054 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 314-474 |
| Cow position: | chr16:26672093-26672258 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 57 |
| Conread position: | 314-501 |
| Cow position: | chr16:47367448-47367255 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 125, 98 |
| Conread position: | 314-504 |
| Cow position: | chr16:28066509-28066311 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 317-435 |
| Cow position: | chr16:53092870-53092752 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-477 |
| Cow position: | chr16:29764336-29764177 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 317-482 |
| Cow position: | chr16:4553630-4553800 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 317-500 |
| Cow position: | chr16:11744989-11744799 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 319-504 |
| Cow position: | chr16:5488216-5488024 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 319-504 |
| Cow position: | chr16:23249523-23249715 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 319-504 |
| Cow position: | chr16:24621251-24621443 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 319-504 |
| Cow position: | chr16:54432020-54431828 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 322-498 |
| Cow position: | chr16:25168510-25168323 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.