Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 184-486
Cow position:
Alignm length: 309
Alignm identity: 202
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 34

Conread position: 189-498
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 6

Conread position: 191-501
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 90, 13

Conread position: 191-504
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 88, 130

Conread position: 191-504
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 13

Conread position: 192-475
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 77

Conread position: 192-482
Cow position:
Alignm length: 304
Alignm identity: 209
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 121, 39

Conread position: 192-482
Cow position:
Alignm length: 298
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 69

Conread position: 192-486
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 36

Conread position: 192-504
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 122, 80

Conread position: 195-400
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 112, 36

Conread position: 195-486
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 31

Conread position: 195-504
Cow position:
Alignm length: 328
Alignm identity: 218
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 121, 103

Conread position: 196-466
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 71

Conread position: 196-486
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 196-502
Cow position:
Alignm length: 316
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 53

Conread position: 196-504
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 240, 28

Conread position: 198-487
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 185

Conread position: 198-487
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 121, 217

Conread position: 206-504
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 18

Conread position: 207-500
Cow position:
Alignm length: 309
Alignm identity: 205
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 31

Conread position: 220-504
Cow position:
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 220-504
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 178

Conread position: 220-504
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 224-485
Cow position:
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 44

Conread position: 224-491
Cow position:
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 55

Conread position: 224-504
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 224-504
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 135

Conread position: 229-504
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 7, 248

Conread position: 232-501
Cow position:
Alignm length: 286
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 46

Conread position: 233-492
Cow position:
Alignm length: 267
Alignm identity: 177
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 27

Conread position: 235-428
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 190

Conread position: 235-428
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 190

Conread position: 235-447
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 235-447
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 235-462
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 235-482
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 79, 181

Conread position: 235-487
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 63

Conread position: 235-491
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 235-492
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 146

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-500
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 51, 88

Conread position: 235-500
Cow position:
Alignm length: 284
Alignm identity: 199
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 235-501
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-501
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 196
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 80, 109

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 276
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 135

Conread position: 235-504
Cow position:
Alignm length: 283
Alignm identity: 194
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 235-504
Cow position:
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 142

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 84, 23

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 280
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 224

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 51

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 136

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 193
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 165

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 235-504
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 42

Conread position: 236-491
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 160

Conread position: 236-492
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 270

Conread position: 236-499
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 170

Conread position: 236-499
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 262

Conread position: 236-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 236-504
Cow position:
Alignm length: 288
Alignm identity: 194
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 237-485
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 64

Conread position: 237-504
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 139

Conread position: 238-486
Cow position:
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 239-484
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 77, 32

Conread position: 241-483
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 72, 175

Conread position: 241-500
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 73, 181

Conread position: 243-504
Cow position:
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 246-486
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 31

Conread position: 246-487
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 245

Conread position: 248-504
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 71, 18

Conread position: 250-435
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 170

Conread position: 254-504
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 65, 12

Conread position: 256-504
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 124

Conread position: 271-501
Cow position:
Alignm length: 240
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 71

Conread position: 306-469
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 58

Conread position: 312-421
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 312-478
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 86

Conread position: 313-487
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 73

Conread position: 314-499
Cow position:
Alignm length: 188
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 0

Conread position: 314-504
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 314-504
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 172, 94

Conread position: 315-504
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 316-492
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 317-504
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 319-500
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 319-504
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 322-499
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 324-501
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 0

Show alignments to all cow chromosomes.