Cow genome map


           Conread name:
           Ss1.1-rebs12c_l2.5
        

               Conread position:
               188-484
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               122, 5
               

               Conread position:
               189-500
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               192-445
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               122, 221
               

               Conread position:
               192-487
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 11
               

               Conread position:
               192-501
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 49
               

               Conread position:
               192-502
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               192-504
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               193-501
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 44
               

               Conread position:
               195-459
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 77
               

               Conread position:
               195-460
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 82
               

               Conread position:
               195-487
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 161
               

               Conread position:
               195-499
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               195-501
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               117, 11
               

               Conread position:
               196-469
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               123, 97
               

               Conread position:
               196-482
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               196-485
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               115, 200
               

               Conread position:
               196-486
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               196-491
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               115, 147
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 8
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               199-500
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               200-428
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               206-486
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               108, 7
               

               Conread position:
               209-504
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               220-504
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               223-504
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               58, 123
               

               Conread position:
               224-501
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               86, 14
               

               Conread position:
               224-504
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               224-504
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               230-504
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               232-483
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               235-470
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               58, 87
               

               Conread position:
               235-482
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-482
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               84, 146
               

               Conread position:
               235-482
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               235-491
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               235-492
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               80, 156
               

               Conread position:
               235-498
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 187
               

               Conread position:
               235-500
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 252
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               84, 146
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               81, 236
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               77, 276
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               81, 149
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               81, 183
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 188
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               84, 175
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 141
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               81, 130
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 156
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               236-476
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               236-501
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 160
               

               Conread position:
               236-501
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               237-501
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               75, 64
               

               Conread position:
               237-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               238-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               238-504
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 133
               

               Conread position:
               239-504
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               239-504
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               239-504
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 179
               

               Conread position:
               239-504
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               239-504
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               242-504
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               247-504
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               248-504
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               252-500
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 166
               

               Conread position:
               264-413
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               273-486
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               280-469
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               312-482
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               111, 49
               

               Conread position:
               313-492
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               319-492
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               319-504
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               319-504
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               113, 0
               
Show alignments to all cow chromosomes.