Cow genome map


           Conread name:
           Ss1.1-rebs12c_l2.5
        

               Conread position:
               181-492
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               130, 11
               

               Conread position:
               189-499
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               190-470
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               129, 41
               

               Conread position:
               191-485
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               147, 123
               

               Conread position:
               191-486
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               191-502
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               65, 182
               

               Conread position:
               192-436
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               192-500
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               195-487
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 43
               

               Conread position:
               195-500
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               195-500
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               196-432
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               115, 142
               

               Conread position:
               196-482
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               196-487
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 98
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               47, 27
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               199-504
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               116, 5
               

               Conread position:
               199-504
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               114, 47
               

               Conread position:
               199-504
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               202-498
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               206-497
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               69, 112
               

               Conread position:
               208-504
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               220-501
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               220-503
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               67, 190
               

               Conread position:
               220-504
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               90, 270
               

               Conread position:
               220-504
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               225-422
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               228-500
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 156
               

               Conread position:
               234-492
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 237
               

               Conread position:
               234-504
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               235-428
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-447
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 189
               

               Conread position:
               235-470
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               235-478
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               235-487
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-490
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               235-490
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               235-492
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 139
               

               Conread position:
               235-492
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               235-500
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               79, 233
               

               Conread position:
               235-500
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 159
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 176
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 6
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               84, 190
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 141
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               74, 124
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 140
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               75, 41
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 257
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 183
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 269
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               236-482
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               75, 135
               

               Conread position:
               236-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 113
               

               Conread position:
               237-486
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               237-490
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 186
               

               Conread position:
               237-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               237-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               237-504
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               238-482
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               239-504
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 137
               

               Conread position:
               241-487
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               241-504
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               70, 165
               

               Conread position:
               241-504
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               241-504
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               255-504
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 143
               

               Conread position:
               294-504
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               294-504
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               138, 18
               

               Conread position:
               312-483
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               314-504
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               93, 99
               

               Conread position:
               315-499
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               315-501
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               106, 117
               

               Conread position:
               317-504
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               319-487
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               319-491
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               322-501
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               110, 0
               
Show alignments to all cow chromosomes.