Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 181-492
Cow position: chr19:28911914-28911584 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 130, 11

Conread position: 189-499
Cow position: chr19:17883342-17883019 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 35

Conread position: 190-470
Cow position: chr19:2588563-2588271 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 41

Conread position: 191-485
Cow position: chr19:5633131-5633431 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 147, 123

Conread position: 191-486
Cow position: chr19:37653548-37653239 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 120, 41

Conread position: 191-502
Cow position: chr19:5023982-5024313 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 65, 182

Conread position: 192-436
Cow position: chr19:26804421-26804677 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 32

Conread position: 192-500
Cow position: chr19:33641440-33641118 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 14

Conread position: 195-487
Cow position: chr19:35982142-35981829 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 43

Conread position: 195-500
Cow position: chr19:7472431-7472110 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 29

Conread position: 195-500
Cow position: chr19:35621899-35621570 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 26

Conread position: 196-432
Cow position: chr19:28516455-28516699 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 115, 142

Conread position: 196-482
Cow position: chr19:35381704-35382003 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 28

Conread position: 196-487
Cow position: chr19:6173175-6173472 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 98

Conread position: 196-504
Cow position: chr19:28369891-28369575 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 42

Conread position: 196-504
Cow position: chr19:39603101-39603416 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 27

Conread position: 196-504
Cow position: chr19:40248147-40247820 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 27

Conread position: 196-504
Cow position: chr19:42580946-42581263 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 8

Conread position: 199-504
Cow position: chr19:2261081-2261391 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 5

Conread position: 199-504
Cow position: chr19:5384782-5384460 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 114, 47

Conread position: 199-504
Cow position: chr19:39943532-39943852 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 27

Conread position: 202-498
Cow position: chr19:34653753-34654056 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 61, 83

Conread position: 206-497
Cow position: chr19:19406360-19406056 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 69, 112

Conread position: 208-504
Cow position: chr19:39726147-39725842 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 100, 0

Conread position: 220-501
Cow position: chr19:175814-175514 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 220-503
Cow position: chr19:27209062-27209357 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 190

Conread position: 220-504
Cow position: chr19:5781188-5781491 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 90, 270

Conread position: 220-504
Cow position: chr19:30518152-30517846 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 225-422
Cow position: chr19:12057530-12057337 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 60

Conread position: 228-500
Cow position: chr19:29364714-29364441 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 156

Conread position: 234-492
Cow position: chr19:36351601-36351333 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 237

Conread position: 234-504
Cow position: chr19:28801241-28801518 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 7

Conread position: 235-428
Cow position: chr19:27082083-27082282 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 235-447
Cow position: chr19:55217136-55216912 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 189

Conread position: 235-470
Cow position: chr19:48626390-48626137 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 42

Conread position: 235-478
Cow position: chr19:9098943-9098680 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 235-487
Cow position: chr19:55843335-55843065 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 235-490
Cow position: chr19:1293681-1293409 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 235-490
Cow position: chr19:16478536-16478809 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 235-492
Cow position: chr19:19389165-19388889 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 139

Conread position: 235-492
Cow position: chr19:39750544-39750279 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 30

Conread position: 235-500
Cow position: chr19:5732826-5732547 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 233

Conread position: 235-500
Cow position: chr19:39339737-39340020 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 159

Conread position: 235-501
Cow position: chr19:28794994-28795273 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 235-501
Cow position: chr19:42466324-42466038 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 235-504
Cow position: chr19:197339-197056 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 176

Conread position: 235-504
Cow position: chr19:207831-207543 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 235-504
Cow position: chr19:2269970-2270258 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr19:4388914-4388626 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr19:7345365-7345077 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 235-504
Cow position: chr19:7480604-7480891 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 6

Conread position: 235-504
Cow position: chr19:10613559-10613271 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 190

Conread position: 235-504
Cow position: chr19:20611665-20611377 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 141

Conread position: 235-504
Cow position: chr19:22512576-22512288 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 235-504
Cow position: chr19:24734474-24734186 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr19:30037576-30037864 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr19:30473818-30474105 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 124

Conread position: 235-504
Cow position: chr19:33119393-33119681 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr19:33528178-33527890 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 42

Conread position: 235-504
Cow position: chr19:33594168-33594445 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 140

Conread position: 235-504
Cow position: chr19:33876747-33876459 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr19:33944897-33944610 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 81, 11

Conread position: 235-504
Cow position: chr19:34985420-34985146 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 41

Conread position: 235-504
Cow position: chr19:39182209-39182495 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 257

Conread position: 235-504
Cow position: chr19:43148912-43148625 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 183

Conread position: 235-504
Cow position: chr19:45464465-45464189 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 60

Conread position: 235-504
Cow position: chr19:48534061-48533771 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 235-504
Cow position: chr19:55164326-55164610 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 269

Conread position: 235-504
Cow position: chr19:55378226-55377938 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 236-482
Cow position: chr19:36708055-36708312 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 75, 135

Conread position: 236-504
Cow position: chr19:436008-436293 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 113

Conread position: 237-486
Cow position: chr19:12776438-12776178 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 18

Conread position: 237-490
Cow position: chr19:47189116-47189382 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 186

Conread position: 237-504
Cow position: chr19:5902356-5902070 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 237-504
Cow position: chr19:15070640-15070354 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 237-504
Cow position: chr19:29393671-29393385 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 238-482
Cow position: chr19:38558959-38559222 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 159

Conread position: 239-504
Cow position: chr19:5716259-5716535 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 137

Conread position: 241-487
Cow position: chr19:30758785-30758526 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 241-504
Cow position: chr19:14156778-14157058 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 165

Conread position: 241-504
Cow position: chr19:28450150-28449869 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 118

Conread position: 241-504
Cow position: chr19:37844455-37844736 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 255-504
Cow position: chr19:7491398-7491143 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 143

Conread position: 294-504
Cow position: chr19:4551866-4552072 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 294-504
Cow position: chr19:12552973-12553189 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 138, 18

Conread position: 312-483
Cow position: chr19:33907557-33907377 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 314-504
Cow position: chr19:1354042-1354239 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 99

Conread position: 315-499
Cow position: chr19:15871399-15871590 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 315-501
Cow position: chr19:10194876-10194688 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 117

Conread position: 317-504
Cow position: chr19:7293003-7293197 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 319-487
Cow position: chr19:1663261-1663087 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 319-491
Cow position: chr19:8206762-8206941 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 322-501
Cow position: chr19:21337600-21337786 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 0

Show alignments to all cow chromosomes.