Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 190-484
Cow position: chr23:2317832-2317523 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 5

Conread position: 191-435
Cow position: chr23:6441763-6442007 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 62

Conread position: 192-405
Cow position: chr23:26684208-26683984 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 114, 0

Conread position: 192-470
Cow position: chr23:35275495-35275203 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 192-473
Cow position: chr23:10421604-10421912 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 46

Conread position: 192-480
Cow position: chr23:15351471-15351174 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 119, 140

Conread position: 194-504
Cow position: chr23:16611542-16611873 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 10

Conread position: 195-487
Cow position: chr23:6667204-6666892 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 19, 180

Conread position: 195-492
Cow position: chr23:16368180-16367876 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 76

Conread position: 196-434
Cow position: chr23:29459986-29460238 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 28

Conread position: 196-444
Cow position: chr23:10905140-10904889 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 28

Conread position: 196-470
Cow position: chr23:20379416-20379139 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 196-484
Cow position: chr23:31276760-31276453 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 110, 33

Conread position: 196-485
Cow position: chr23:26308297-26307993 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 46, 28

Conread position: 196-486
Cow position: chr23:7288281-7288589 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 43

Conread position: 196-492
Cow position: chr23:24822776-24823066 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 17

Conread position: 196-499
Cow position: chr23:40830903-40831218 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 115, 17

Conread position: 197-500
Cow position: chr23:30166091-30166403 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 119, 38

Conread position: 198-459
Cow position: chr23:35321863-35322121 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 113, 31

Conread position: 198-473
Cow position: chr23:7493369-7493097 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 230, 46

Conread position: 198-481
Cow position: chr23:7961896-7962189 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 23

Conread position: 198-482
Cow position: chr23:32427521-32427819 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 87

Conread position: 199-476
Cow position: chr23:2040306-2040026 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 25, 33

Conread position: 199-492
Cow position: chr23:33574611-33574921 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 22

Conread position: 199-501
Cow position: chr23:40372094-40372416 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 77

Conread position: 209-486
Cow position: chr23:15039068-15039347 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 29

Conread position: 210-504
Cow position: chr23:24517083-24516783 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 21

Conread position: 214-461
Cow position: chr23:9228641-9228382 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 25

Conread position: 224-504
Cow position: chr23:20541056-20540757 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 25

Conread position: 225-459
Cow position: chr23:8100485-8100245 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 57

Conread position: 231-504
Cow position: chr23:37199281-37199578 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 235-405
Cow position: chr23:28306066-28305885 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 235-482
Cow position: chr23:13536647-13536391 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 80

Conread position: 235-482
Cow position: chr23:39745088-39744823 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 51, 42

Conread position: 235-486
Cow position: chr23:26828477-26828208 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 235-490
Cow position: chr23:771267-771541 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-500
Cow position: chr23:27402361-27402076 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 235-501
Cow position: chr23:15215610-15215894 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 81, 181

Conread position: 235-504
Cow position: chr23:1048649-1048937 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr23:1338266-1338545 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 46

Conread position: 235-504
Cow position: chr23:1959351-1959066 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 160

Conread position: 235-504
Cow position: chr23:2023860-2024148 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr23:2320721-2321005 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 24

Conread position: 235-504
Cow position: chr23:2720681-2720392 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:2761123-2760835 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 81, 183

Conread position: 235-504
Cow position: chr23:2791538-2791828 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr23:3285983-3285695 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:3302079-3301792 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 235-504
Cow position: chr23:3417104-3417392 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr23:3709628-3709341 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 31

Conread position: 235-504
Cow position: chr23:4265392-4265679 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 235-504
Cow position: chr23:4436843-4436569 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 60

Conread position: 235-504
Cow position: chr23:4532473-4532761 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:4891920-4891632 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 77, 0

Conread position: 235-504
Cow position: chr23:5441142-5440854 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:5624348-5624636 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr23:10679609-10679897 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr23:10937078-10937366 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:11079608-11079320 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:11343721-11343433 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 235

Conread position: 235-504
Cow position: chr23:11712443-11712731 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:11782010-11781719 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 235-504
Cow position: chr23:14959727-14960012 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 235-504
Cow position: chr23:14970727-14971015 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 235-504
Cow position: chr23:15528811-15528523 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 183

Conread position: 235-504
Cow position: chr23:17846222-17845934 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr23:20152996-20153285 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 235-504
Cow position: chr23:21008380-21008668 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 235-504
Cow position: chr23:21772685-21772973 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 189

Conread position: 235-504
Cow position: chr23:22144086-22144372 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 35

Conread position: 235-504
Cow position: chr23:24119779-24119491 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 183

Conread position: 235-504
Cow position: chr23:25351584-25351297 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 235-504
Cow position: chr23:29043007-29042719 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:30634370-30634658 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr23:31605652-31605364 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:31704119-31703831 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr23:41143665-41143377 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 236-504
Cow position: chr23:5396357-5396644 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 236-504
Cow position: chr23:28083870-28084157 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 237-499
Cow position: chr23:345233-345514 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 239-476
Cow position: chr23:16496055-16496297 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 197, 76

Conread position: 239-500
Cow position: chr23:20170981-20171257 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 138

Conread position: 241-482
Cow position: chr23:36473579-36473327 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 38

Conread position: 241-500
Cow position: chr23:11078496-11078228 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 133

Conread position: 242-499
Cow position: chr23:3489790-3490035 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 9

Conread position: 255-504
Cow position: chr23:2369014-2368761 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 177, 64

Conread position: 263-470
Cow position: chr23:4839708-4839495 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 57

Conread position: 263-482
Cow position: chr23:38721739-38721512 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 98

Conread position: 277-501
Cow position: chr23:25594191-25593961 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 15

Conread position: 312-480
Cow position: chr23:39246971-39246798 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 113

Conread position: 312-492
Cow position: chr23:32986983-32987169 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 122, 47

Conread position: 314-487
Cow position: chr23:616136-616311 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 314-504
Cow position: chr23:19492692-19492493 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 318-504
Cow position: chr23:5871435-5871625 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 6

Conread position: 319-504
Cow position: chr23:1248399-1248591 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 319-504
Cow position: chr23:4081273-4081081 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 319-504
Cow position: chr23:14790612-14790420 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 319-504
Cow position: chr23:19317616-19317424 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 319-504
Cow position: chr23:39388791-39388599 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 146

Conread position: 321-489
Cow position: chr23:22170016-22169842 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 324-491
Cow position: chr23:2722887-2722713 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 108, 0

Show alignments to all cow chromosomes.