Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 57-184
Cow position: chr24:28421143-28421270 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 189-435
Cow position: chr24:37197362-37197611 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 92, 223

Conread position: 191-483
Cow position: chr24:20507691-20507996 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 97

Conread position: 191-486
Cow position: chr24:25647708-25648019 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 191-504
Cow position: chr24:42938596-42938929 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 192-504
Cow position: chr24:6052441-6052114 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 127, 12

Conread position: 195-407
Cow position: chr24:27229975-27230191 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 177

Conread position: 195-492
Cow position: chr24:6666428-6666741 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 32

Conread position: 195-500
Cow position: chr24:26274273-26274581 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 11

Conread position: 195-504
Cow position: chr24:19643647-19643323 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 9, 30

Conread position: 195-504
Cow position: chr24:33575611-33575292 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 25

Conread position: 196-430
Cow position: chr24:33775117-33775359 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 115, 41

Conread position: 196-430
Cow position: chr24:42156802-42157032 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 187, 17

Conread position: 196-485
Cow position: chr24:19902918-19903218 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 28

Conread position: 196-492
Cow position: chr24:37318199-37318500 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 130, 119

Conread position: 197-504
Cow position: chr24:25059325-25059642 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 161

Conread position: 198-504
Cow position: chr24:19199307-19198985 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 118, 10

Conread position: 199-468
Cow position: chr24:7466957-7467230 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 233, 77

Conread position: 199-482
Cow position: chr24:16297846-16298114 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 68

Conread position: 199-492
Cow position: chr24:9176650-9176946 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 148

Conread position: 202-459
Cow position: chr24:34602540-34602267 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 114, 59

Conread position: 206-470
Cow position: chr24:40120753-40121026 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 112, 210

Conread position: 218-504
Cow position: chr24:17324028-17323726 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 20

Conread position: 220-408
Cow position: chr24:42250176-42250372 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 152

Conread position: 220-504
Cow position: chr24:8607661-8607358 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 9

Conread position: 224-500
Cow position: chr24:24249173-24249468 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 7, 194

Conread position: 225-500
Cow position: chr24:39680823-39680541 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 94

Conread position: 230-504
Cow position: chr24:22794881-22794588 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 231-429
Cow position: chr24:20121768-20121964 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 31, 40

Conread position: 231-504
Cow position: chr24:16558958-16559250 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 231-504
Cow position: chr24:17030673-17030966 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 231-504
Cow position: chr24:36556259-36556549 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 16

Conread position: 235-476
Cow position: chr24:22953879-22953620 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-478
Cow position: chr24:25372420-25372159 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-482
Cow position: chr24:37222502-37222764 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 78, 26

Conread position: 235-486
Cow position: chr24:17105560-17105827 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 162

Conread position: 235-486
Cow position: chr24:22287894-22287630 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 184

Conread position: 235-491
Cow position: chr24:12090297-12090021 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 235-492
Cow position: chr24:14173447-14173725 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 190

Conread position: 235-492
Cow position: chr24:40272164-40271892 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 189

Conread position: 235-499
Cow position: chr24:29181675-29181412 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 197, 69

Conread position: 235-500
Cow position: chr24:18267169-18267458 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 235-500
Cow position: chr24:33937246-33936962 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 235-504
Cow position: chr24:1841555-1841843 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:3162787-3162499 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:3850912-3850624 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:6020761-6021049 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:6079743-6079455 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 235-504
Cow position: chr24:6412795-6412507 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:9546489-9546201 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr24:9549581-9549295 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 47

Conread position: 235-504
Cow position: chr24:11208290-11208578 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 42

Conread position: 235-504
Cow position: chr24:14194532-14194819 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 76, 42

Conread position: 235-504
Cow position: chr24:14352669-14352381 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:14760210-14759923 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 146

Conread position: 235-504
Cow position: chr24:15296432-15296144 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr24:15372097-15371812 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 162

Conread position: 235-504
Cow position: chr24:17545537-17545254 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 62

Conread position: 235-504
Cow position: chr24:19688262-19688550 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:20283895-20284178 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 26

Conread position: 235-504
Cow position: chr24:27148421-27148139 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 81, 24

Conread position: 235-504
Cow position: chr24:31067728-31068016 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:35823888-35824172 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr24:36721761-36721474 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 81, 147

Conread position: 235-504
Cow position: chr24:40467096-40467387 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr24:40551942-40551654 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 236-500
Cow position: chr24:12264473-12264755 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 161

Conread position: 236-501
Cow position: chr24:36726471-36726187 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 17

Conread position: 236-504
Cow position: chr24:20367682-20367396 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 113

Conread position: 236-504
Cow position: chr24:22975124-22974836 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 236-504
Cow position: chr24:25285075-25284807 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 129

Conread position: 237-504
Cow position: chr24:6964165-6963879 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 237-504
Cow position: chr24:7597244-7597530 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 237-504
Cow position: chr24:12348078-12348365 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 143

Conread position: 237-504
Cow position: chr24:31842855-31842569 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 239-481
Cow position: chr24:7576507-7576768 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 155

Conread position: 239-504
Cow position: chr24:6326058-6326342 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 241-485
Cow position: chr24:7404749-7405011 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 241-504
Cow position: chr24:6542626-6542908 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 177

Conread position: 246-486
Cow position: chr24:16266763-16266511 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 76

Conread position: 286-482
Cow position: chr24:2731772-2731973 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 142, 103

Conread position: 313-492
Cow position: chr24:25465509-25465697 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 314-504
Cow position: chr24:207778-207975 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 314-504
Cow position: chr24:12697789-12697987 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 317-504
Cow position: chr24:12669688-12669494 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 317-504
Cow position: chr24:16603379-16603566 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 34

Conread position: 319-430
Cow position: chr24:38676625-38676516 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 319-499
Cow position: chr24:40519598-40519786 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 319-501
Cow position: chr24:12578742-12578553 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 319-504
Cow position: chr24:6440974-6440782 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 319-504
Cow position: chr24:7064787-7064595 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 117, 0

Show alignments to all cow chromosomes.