Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 189-492
Cow position: chr25:9647018-9646703 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 106, 228

Conread position: 191-434
Cow position: chr25:24731752-24732000 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 30

Conread position: 191-504
Cow position: chr25:29313262-29313587 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 33

Conread position: 192-470
Cow position: chr25:21070799-21071097 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 119, 185

Conread position: 192-473
Cow position: chr25:22479921-22480217 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 114, 209

Conread position: 192-478
Cow position: chr25:18286219-18286519 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 22

Conread position: 192-492
Cow position: chr25:34494090-34494415 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 31

Conread position: 192-504
Cow position: chr25:23740190-23740517 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 44, 32

Conread position: 195-486
Cow position: chr25:24637086-24637398 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 196-436
Cow position: chr25:13941685-13941937 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 36

Conread position: 196-470
Cow position: chr25:25731591-25731301 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 118, 211

Conread position: 196-482
Cow position: chr25:12865832-12865536 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 252

Conread position: 196-486
Cow position: chr25:14618963-14619260 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 32

Conread position: 199-444
Cow position: chr25:14961808-14962069 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 30

Conread position: 199-453
Cow position: chr25:382810-383082 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 6, 103

Conread position: 199-479
Cow position: chr25:26753272-26753568 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 22

Conread position: 206-440
Cow position: chr25:13965953-13965711 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 206-486
Cow position: chr25:23672822-23673116 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 18

Conread position: 206-504
Cow position: chr25:20100655-20100340 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 19

Conread position: 219-439
Cow position: chr25:30311697-30311927 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 36

Conread position: 227-492
Cow position: chr25:35567860-35568146 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 228-504
Cow position: chr25:18072246-18071963 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 83, 110

Conread position: 235-385
Cow position: chr25:32610406-32610557 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 84, 147

Conread position: 235-479
Cow position: chr25:24303251-24303512 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 240

Conread position: 235-482
Cow position: chr25:3373624-3373891 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 235-487
Cow position: chr25:17904654-17904384 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 42

Conread position: 235-488
Cow position: chr25:26705868-26706140 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 235-490
Cow position: chr25:40657539-40657274 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 143

Conread position: 235-490
Cow position: chr25:41121019-41120749 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 16

Conread position: 235-492
Cow position: chr25:13960081-13959809 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 36

Conread position: 235-500
Cow position: chr25:34503208-34503492 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-501
Cow position: chr25:29802731-29803016 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 190

Conread position: 235-504
Cow position: chr25:7223418-7223705 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr25:10633992-10634278 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 235-504
Cow position: chr25:12939193-12939481 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr25:17586006-17586293 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 43

Conread position: 235-504
Cow position: chr25:18190360-18190644 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 43

Conread position: 235-504
Cow position: chr25:18886467-18886741 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 183

Conread position: 235-504
Cow position: chr25:19337311-19337595 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 110

Conread position: 235-504
Cow position: chr25:20633775-20633493 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 77, 0

Conread position: 235-504
Cow position: chr25:21949812-21949525 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 109

Conread position: 235-504
Cow position: chr25:24007922-24007634 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 42

Conread position: 235-504
Cow position: chr25:24655155-24655443 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 146

Conread position: 235-504
Cow position: chr25:25509887-25509599 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr25:26282039-26281751 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr25:28420691-28420972 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 86

Conread position: 235-504
Cow position: chr25:28862886-28862597 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr25:32577648-32577937 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 84, 251

Conread position: 235-504
Cow position: chr25:34509165-34509453 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr25:34673572-34673846 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 198, 58

Conread position: 235-504
Cow position: chr25:35571833-35571546 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 235-504
Cow position: chr25:36350754-36350466 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 236-504
Cow position: chr25:23326013-23326300 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 236-504
Cow position: chr25:26781069-26781356 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 145

Conread position: 237-500
Cow position: chr25:11043633-11043353 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 168

Conread position: 237-501
Cow position: chr25:11896630-11896347 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 239-504
Cow position: chr25:11665686-11665398 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 142

Conread position: 239-504
Cow position: chr25:15005080-15004802 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 240-504
Cow position: chr25:8875530-8875813 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 247-504
Cow position: chr25:20772326-20772599 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 68, 14

Conread position: 247-504
Cow position: chr25:35553672-35553410 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 135

Conread position: 300-476
Cow position: chr25:2369787-2369604 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 21, 111

Conread position: 311-504
Cow position: chr25:18423634-18423438 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 123

Conread position: 312-504
Cow position: chr25:14996235-14996437 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 105

Conread position: 314-498
Cow position: chr25:11929625-11929806 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 170, 97

Conread position: 314-504
Cow position: chr25:22151000-22150802 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 316-501
Cow position: chr25:35561578-35561768 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 68

Conread position: 317-504
Cow position: chr25:22197466-22197660 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 319-504
Cow position: chr25:33990330-33990521 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 320-504
Cow position: chr25:30810714-30810527 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 48

Conread position: 324-504
Cow position: chr25:34257193-34257380 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 340-502
Cow position: chr25:25109128-25109297 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 91, 0

Show alignments to all cow chromosomes.