Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 189-484
Cow position: chr26:11269538-11269232 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 35

Conread position: 191-401
Cow position: chr26:22621521-22621319 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 41

Conread position: 191-504
Cow position: chr26:35334898-35335230 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 47

Conread position: 192-429
Cow position: chr26:27432422-27432671 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 47

Conread position: 192-449
Cow position: chr26:26305988-26306249 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 45

Conread position: 192-473
Cow position: chr26:18519399-18519125 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 240, 47

Conread position: 192-499
Cow position: chr26:9838134-9838447 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 77, 39

Conread position: 192-504
Cow position: chr26:11290458-11290135 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 194

Conread position: 196-430
Cow position: chr26:5767198-5766976 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 196-485
Cow position: chr26:35148569-35148868 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 114, 23

Conread position: 196-504
Cow position: chr26:25340627-25340940 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 32

Conread position: 197-492
Cow position: chr26:33950061-33950374 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 6, 0

Conread position: 199-486
Cow position: chr26:15892285-15891981 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 114, 145

Conread position: 205-457
Cow position: chr26:14364935-14365204 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 20, 33

Conread position: 208-504
Cow position: chr26:35520099-35520422 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 16

Conread position: 222-428
Cow position: chr26:4111995-4112199 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 83

Conread position: 224-504
Cow position: chr26:6321387-6321089 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 13

Conread position: 225-504
Cow position: chr26:1620937-1620633 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 234-504
Cow position: chr26:18036166-18035887 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 90, 0

Conread position: 235-482
Cow position: chr26:22691660-22691395 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-484
Cow position: chr26:12551718-12551989 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 235-486
Cow position: chr26:7506443-7506712 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 51

Conread position: 235-486
Cow position: chr26:8084096-8083827 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 235-491
Cow position: chr26:35560791-35561066 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-500
Cow position: chr26:8810146-8809866 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 235-500
Cow position: chr26:30586076-30586359 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 31

Conread position: 235-501
Cow position: chr26:2244236-2244509 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 83, 150

Conread position: 235-501
Cow position: chr26:9558610-9558896 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-501
Cow position: chr26:18857390-18857105 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 235-502
Cow position: chr26:35423769-35423481 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 235-504
Cow position: chr26:1088454-1088167 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:1390252-1389966 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 143

Conread position: 235-504
Cow position: chr26:2201800-2201516 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:2348901-2349189 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:3230738-3230450 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:3537392-3537104 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:4729054-4729341 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 188

Conread position: 235-504
Cow position: chr26:8654068-8654347 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 184

Conread position: 235-504
Cow position: chr26:10699228-10699509 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 42

Conread position: 235-504
Cow position: chr26:13183580-13183293 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 69

Conread position: 235-504
Cow position: chr26:13806757-13807044 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 99

Conread position: 235-504
Cow position: chr26:14487987-14488271 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 26

Conread position: 235-504
Cow position: chr26:14897271-14896983 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr26:17393625-17393909 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 244

Conread position: 235-504
Cow position: chr26:17429205-17429493 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:18804100-18804381 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:21535632-21535344 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position: chr26:26286129-26285845 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:27987319-27987606 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 235-504
Cow position: chr26:30594359-30594647 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position: chr26:34265234-34264946 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 54

Conread position: 235-504
Cow position: chr26:35121972-35122259 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 161

Conread position: 235-504
Cow position: chr26:35191278-35191565 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 24

Conread position: 236-413
Cow position: chr26:16508346-16508160 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 237-486
Cow position: chr26:17993723-17993992 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 237-504
Cow position: chr26:1346726-1347012 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 144

Conread position: 241-504
Cow position: chr26:12585274-12585556 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 250-501
Cow position: chr26:31793981-31793713 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 252-504
Cow position: chr26:34272306-34272053 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 42

Conread position: 272-504
Cow position: chr26:23590873-23590637 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 8

Conread position: 285-504
Cow position: chr26:6030889-6031100 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 62

Conread position: 305-473
Cow position: chr26:26281028-26280855 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 8

Conread position: 312-492
Cow position: chr26:26313038-26312855 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 313-482
Cow position: chr26:22695200-22695026 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 313-494
Cow position: chr26:15550970-15551155 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 81

Conread position: 317-501
Cow position: chr26:3199372-3199563 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 317-504
Cow position: chr26:4122844-4122650 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 317-504
Cow position: chr26:18773088-18773282 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 322-504
Cow position: chr26:6426205-6426014 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 329-501
Cow position: chr26:21823469-21823640 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 155, 107

Show alignments to all cow chromosomes.