Cow genome map


           Conread name:
           Ss1.1-rebs12c_l2.5
        

               Conread position:
               189-484
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               191-401
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               191-504
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               192-429
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               119, 47
               

               Conread position:
               192-449
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 45
               

               Conread position:
               192-473
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               240, 47
               

               Conread position:
               192-499
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               192-504
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               121, 194
               

               Conread position:
               196-430
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               196-485
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               114, 23
               

               Conread position:
               196-504
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               123, 32
               

               Conread position:
               197-492
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               199-486
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               114, 145
               

               Conread position:
               205-457
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               208-504
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               222-428
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 83
               

               Conread position:
               224-504
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               225-504
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               234-504
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               235-482
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-484
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               235-486
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               235-486
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               235-491
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-500
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               235-500
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-501
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-502
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 143
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               84, 188
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 184
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 69
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 99
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 244
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 54
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               84, 161
               

               Conread position:
               235-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               236-413
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               237-486
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               237-504
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 144
               

               Conread position:
               241-504
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               250-501
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               252-504
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               30, 42
               

               Conread position:
               272-504
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               158, 8
               

               Conread position:
               285-504
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 62
               

               Conread position:
               305-473
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               312-492
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               313-482
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               313-494
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               119, 81
               

               Conread position:
               317-501
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               317-504
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               317-504
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               322-504
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               329-501
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               155, 107
               
Show alignments to all cow chromosomes.