Cow genome map

Conread name: Ss1.1-rebs12c_l2.5

Conread position: 185-493
Cow position:
Alignm length: 328
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 53

Conread position: 189-405
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 95, 13

Conread position: 189-499
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 37

Conread position: 189-500
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 47, 23

Conread position: 192-422
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 192-459
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 76

Conread position: 192-461
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 123, 39

Conread position: 192-467
Cow position:
Alignm length: 292
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 190

Conread position: 192-478
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 127, 61

Conread position: 192-486
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 37

Conread position: 192-487
Cow position:
Alignm length: 317
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 47

Conread position: 192-504
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 7

Conread position: 195-478
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 183, 19

Conread position: 195-482
Cow position:
Alignm length: 295
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 33

Conread position: 195-503
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 29

Conread position: 195-504
Cow position:
Alignm length: 319
Alignm identity: 206
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 29

Conread position: 195-504
Cow position:
Alignm length: 318
Alignm identity: 207
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 42

Conread position: 196-492
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 30, 172

Conread position: 196-501
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 22

Conread position: 196-501
Cow position:
Alignm length: 320
Alignm identity: 219
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 111, 45

Conread position: 196-502
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 28

Conread position: 197-504
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 142

Conread position: 199-391
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 27

Conread position: 199-482
Cow position:
Alignm length: 306
Alignm identity: 216
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 76, 268

Conread position: 200-435
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 113, 0

Conread position: 202-502
Cow position:
Alignm length: 313
Alignm identity: 203
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 114, 169

Conread position: 211-504
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 28

Conread position: 212-504
Cow position:
Alignm length: 314
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 25

Conread position: 218-504
Cow position:
Alignm length: 306
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 200

Conread position: 219-492
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 5

Conread position: 222-504
Cow position:
Alignm length: 311
Alignm identity: 207
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 211

Conread position: 224-504
Cow position:
Alignm length: 300
Alignm identity: 199
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 95, 13

Conread position: 225-487
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 60

Conread position: 225-504
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 226-501
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 27

Conread position: 228-499
Cow position:
Alignm length: 279
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 181, 140

Conread position: 229-504
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 11

Conread position: 229-504
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 231-500
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 127

Conread position: 233-492
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 84

Conread position: 235-486
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 42

Conread position: 235-490
Cow position:
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 183

Conread position: 235-491
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 42

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 235-492
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 146

Conread position: 235-492
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 79

Conread position: 235-492
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 235-501
Cow position:
Alignm length: 287
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 103

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 35

Conread position: 235-504
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 120

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 196
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 196
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 54

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 110

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 150

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 31

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 146

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 79, 146

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 183

Conread position: 235-504
Cow position:
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 19

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 276

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 141

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 192

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 54

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 183

Conread position: 235-504
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 161

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 42

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 80, 128

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 180

Conread position: 235-504
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 183

Conread position: 235-504
Cow position:
Alignm length: 286
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 190

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 16

Conread position: 235-504
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 20, 188

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 235-504
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 235-504
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 236-476
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 133

Conread position: 236-504
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 236-504
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 177

Conread position: 236-504
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 237-504
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 237-504
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 77, 159

Conread position: 238-483
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 174

Conread position: 239-504
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 239-504
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 240-504
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 55

Conread position: 241-491
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 79

Conread position: 242-500
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 134

Conread position: 256-504
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 264-504
Cow position:
Alignm length: 248
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 168, 48

Conread position: 294-504
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 138, 18

Conread position: 318-487
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 93

Conread position: 319-504
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 18

Conread position: 320-504
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 321-500
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 329-503
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 0

Show alignments to all cow chromosomes.