Cow genome map
| Conread name: | Ss1.1-recc2803c_j4.5 |
| Conread position: | 1-334 |
| Cow position: | chr29:31598414-31598741 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 117-334 |
| Cow position: | chr29:31655689-31655473 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 333-431 |
| Cow position: | chr29:31643631-31643533 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-445 |
| Cow position: | chr29:31607693-31607805 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-643 |
| Cow position: | chr29:31642058-31641852 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 446-643 |
| Cow position: | chr29:31608224-31608421 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 638-745 |
| Cow position: | chr29:31608994-31609101 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 739-856 |
| Cow position: | chr29:31636105-31635987 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 743-867 |
| Cow position: | chr29:31609209-31609333 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 116 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 918-1006 |
| Cow position: | chr29:31610175-31610262 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1005-1104 |
| Cow position: | chr29:31610706-31610805 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1101-1209 |
| Cow position: | chr29:31611119-31611228 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1198-1280 |
| Cow position: | chr29:31611354-31611436 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 80 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1198-1280 |
| Cow position: | chr29:31621265-31621183 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1282-1408 |
| Cow position: | chr29:31611614-31611740 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 121 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1405-1712 |
| Cow position: | chr29:31613031-31613363 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 247 |
Show alignments to all cow chromosomes.