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Cow genome map

           
Conread name:
           
Ss1.1-recc2810c_k5.5
        

               
Conread position:
               
302-568
               

               
Cow position:
               
chr21:42390679-42390407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 230
               

               
Conread position:
               
316-563
               

               
Cow position:
               
chr21:28617137-28617389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
316-564
               

               
Cow position:
               
chr21:23606206-23606462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
316-564
               

               
Cow position:
               
chr21:44671291-44671541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
48, 6
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr21:13752149-13752383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr21:17433715-17433480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
317-560
               

               
Cow position:
               
chr21:2472909-2472663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
317-560
               

               
Cow position:
               
chr21:47140155-47139909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
317-563
               

               
Cow position:
               
chr21:1590797-1591056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:2871178-2870928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:5237943-5238194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:5840710-5840960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 159
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:7666519-7666268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:20910566-20910323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:28210723-28210973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:32560101-32559850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:42540684-42540432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr21:44219766-44220023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-573
               

               
Cow position:
               
chr21:34909730-34909987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
318-564
               

               
Cow position:
               
chr21:642884-643125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
322-473
               

               
Cow position:
               
chr21:3381718-3381562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
327-515
               

               
Cow position:
               
chr21:43266614-43266424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-552
               

               
Cow position:
               
chr21:7597392-7597165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-558
               

               
Cow position:
               
chr21:13257219-13257452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
327-558
               

               
Cow position:
               
chr21:44122604-44122837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:48022-48259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:451753-451988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:3496627-3496393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:3923790-3924026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:4473469-4473236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:5641959-5641724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:7047306-7047073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:7524996-7525231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:9209186-9209420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:10075385-10075152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 178
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:10436719-10436953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:10756790-10757025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:11143971-11143736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:11292585-11292822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:11353371-11353606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:11509816-11510050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:13735283-13735048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:16575568-16575333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:18574393-18574628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:19350982-19350748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:19614123-19614357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:19626831-19626596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:20370244-20370479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:21103597-21103832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:21623963-21624198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:21909904-21910139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:22100321-22100086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:23329464-23329228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:23341530-23341766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:25598543-25598778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:26756844-26756611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:27147673-27147440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:27619641-27619406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:29954769-29955004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:30655518-30655753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:31948441-31948676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:31950292-31950527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:33107615-33107380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:34074516-34074751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:34181544-34181779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:36781004-36781239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:40479140-40479375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:41795846-41795610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:42917672-42917907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:45842124-45841889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:47978146-47978381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-563
               

               
Cow position:
               
chr21:4585797-4585562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:31860-32098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:725339-725102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:750287-750526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:4998936-4998697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:5857587-5857348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:12365936-12366175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:16889965-16889726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:20262787-20262546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:26628646-26628885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:26744408-26744169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:29423937-29424177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:34738143-34738386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:37924055-37924301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:38691743-38691978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:39429498-39429736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:39486395-39486157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:42443058-42442819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr21:47429219-47429457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 229
               

               
Conread position:
               
327-565
               

               
Cow position:
               
chr21:2514723-2514963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-567
               

               
Cow position:
               
chr21:30571201-30570960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-567
               

               
Cow position:
               
chr21:34899806-34899564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 236
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr21:7038314-7038069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr21:26854814-26854569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr21:33709621-33709376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr21:33770556-33770801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr21:33901305-33901550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr21:34900554-34900799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr21:36892353-36892108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr21:38848921-38848676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-591
               

               
Cow position:
               
chr21:32359016-32358750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
328-565
               

               
Cow position:
               
chr21:30151075-30150830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 224
               

               
Conread position:
               
329-562
               

               
Cow position:
               
chr21:22140791-22140551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
329-564
               

               
Cow position:
               
chr21:10514364-10514600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
329-564
               

               
Cow position:
               
chr21:13111244-13111009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
329-564
               

               
Cow position:
               
chr21:22464340-22464578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
329-564
               

               
Cow position:
               
chr21:31576063-31576302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
329-564
               

               
Cow position:
               
chr21:46132445-46132210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 223
               

               
Conread position:
               
329-564
               

               
Cow position:
               
chr21:46912094-46912332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
330-501
               

               
Cow position:
               
chr21:29955696-29955523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-520
               

               
Cow position:
               
chr21:3586018-3585832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
330-520
               

               
Cow position:
               
chr21:33350255-33350445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
330-522
               

               
Cow position:
               
chr21:38917787-38917979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
31, 152
               

               
Conread position:
               
330-530
               

               
Cow position:
               
chr21:35437800-35437596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
330-532
               

               
Cow position:
               
chr21:21908027-21907823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-547
               

               
Cow position:
               
chr21:297275-297494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-547
               

               
Cow position:
               
chr21:2293311-2293091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-549
               

               
Cow position:
               
chr21:17454957-17455176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
330-549
               

               
Cow position:
               
chr21:19957784-19958003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
330-549
               

               
Cow position:
               
chr21:28057145-28057371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
330-552
               

               
Cow position:
               
chr21:912409-912188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
330-552
               

               
Cow position:
               
chr21:6623701-6623924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
330-552
               

               
Cow position:
               
chr21:28512093-28512317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-555
               

               
Cow position:
               
chr21:46143273-46143503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
330-560
               

               
Cow position:
               
chr21:1752272-1752504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-560
               

               
Cow position:
               
chr21:26875473-26875705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-561
               

               
Cow position:
               
chr21:33209753-33209984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
330-561
               

               
Cow position:
               
chr21:45331419-45331204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
330-562
               

               
Cow position:
               
chr21:3765885-3765654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
330-562
               

               
Cow position:
               
chr21:47823720-47823481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:4905417-4905180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:5595215-5595451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:6051029-6051270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:12153687-12153920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:27623458-27623696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:27743293-27743528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:37706862-37706631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:39401146-39401387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr21:49662869-49662629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 196
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:2927680-2927445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:4189393-4189622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:5649459-5649694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:6697539-6697304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:8420221-8420453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:12465902-12466144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:14727608-14727836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:20925953-20925718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 199
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:21000503-21000262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:21480627-21480391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:24130638-24130869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 194
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:25473054-25473289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
34, 210
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:26557498-26557270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:27146653-27146417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:27863968-27863731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:28599323-28599555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 155
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:29069766-29069540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:30250653-30250420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 199
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:32297954-32297714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:36163404-36163175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:36657121-36657368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:36756160-36756402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
34, 219
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:38900336-38900561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:44074013-44074233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:44657870-44658106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:44861710-44861467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:45781855-45781620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 207
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr21:48638191-48637958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
330-570
               

               
Cow position:
               
chr21:9363492-9363244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 215
               

               
Conread position:
               
330-571
               

               
Cow position:
               
chr21:43866-44114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-573
               

               
Cow position:
               
chr21:18289216-18289460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
330-580
               

               
Cow position:
               
chr21:25799917-25800175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
330-582
               

               
Cow position:
               
chr21:2261129-2260866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 247
               

               
Conread position:
               
331-564
               

               
Cow position:
               
chr21:612214-611979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
331-564
               

               
Cow position:
               
chr21:15742550-15742309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
331-569
               

               
Cow position:
               
chr21:1765653-1765405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
332-564
               

               
Cow position:
               
chr21:23192965-23192730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
335-524
               

               
Cow position:
               
chr21:4812447-4812256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-525
               

               
Cow position:
               
chr21:14293810-14293619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
335-525
               

               
Cow position:
               
chr21:47532590-47532791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
335-533
               

               
Cow position:
               
chr21:33316478-33316278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-542
               

               
Cow position:
               
chr21:29253330-29253115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-548
               

               
Cow position:
               
chr21:28026683-28026898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
335-549
               

               
Cow position:
               
chr21:18846266-18846055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
29, 193
               

               
Conread position:
               
335-554
               

               
Cow position:
               
chr21:29015604-29015381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-557
               

               
Cow position:
               
chr21:5634573-5634802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 154
               

               
Conread position:
               
335-560
               

               
Cow position:
               
chr21:13632447-13632673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
335-560
               

               
Cow position:
               
chr21:30966056-30965828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-561
               

               
Cow position:
               
chr21:168089-167860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-561
               

               
Cow position:
               
chr21:26829680-26829450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-561
               

               
Cow position:
               
chr21:29214599-29214370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-561
               

               
Cow position:
               
chr21:38450125-38449891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-561
               

               
Cow position:
               
chr21:45354994-45355229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-562
               

               
Cow position:
               
chr21:48459312-48459082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr21:10571157-10571387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr21:21785530-21785300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr21:23293597-23293368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr21:24297203-24296976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr21:28442293-28442526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr21:29839723-29839953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr21:33579755-33579977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr21:33983252-33983023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:150033-150264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:684045-684267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:1196424-1196655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:1463790-1464021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:1780911-1781140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:2935192-2934966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:3782657-3782888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:3818668-3818896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:3920655-3920424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:5021025-5021256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:11083068-11082833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:12802226-12801992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:13395111-13395343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:16292973-16293214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:17144703-17144936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:18601225-18601448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:18932052-18932280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:18979298-18979068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 197
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:19237275-19237506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:19766405-19766642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:20588588-20588819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:21027345-21027585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 178
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:21216584-21216353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:22855779-22856007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:23683099-23683338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:26399898-26399667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:26835736-26835507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:27287862-27288094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:28259547-28259785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:28625666-28625895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:29942553-29942789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:30595204-30594964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:31512384-31512153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:31661613-31661849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:31975029-31975268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:32447099-32447330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:33415234-33415003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:33420159-33419927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:33728992-33729221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:34254722-34254494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:34391409-34391182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
29, 197
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:34684910-34685138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
88, 131
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:37299024-37299253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:37352854-37352630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:38908096-38908328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:39583923-39583696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:40128456-40128226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:42558661-42558892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:44761799-44761568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:45263463-45263233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:47767822-47767595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr21:48531067-48531298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
335-568
               

               
Cow position:
               
chr21:17414963-17414737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
335-570
               

               
Cow position:
               
chr21:33832090-33831849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
335-570
               

               
Cow position:
               
chr21:36909374-36909613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
29, 209
               

               
Conread position:
               
335-571
               

               
Cow position:
               
chr21:3813910-3813672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
335-573
               

               
Cow position:
               
chr21:4279192-4279428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
335-579
               

               
Cow position:
               
chr21:8274620-8274378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
336-549
               

               
Cow position:
               
chr21:8126227-8126019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
336-561
               

               
Cow position:
               
chr21:28839859-28840081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
336-562
               

               
Cow position:
               
chr21:6765142-6764916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
336-563
               

               
Cow position:
               
chr21:4282306-4282076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:2810555-2810326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:2904905-2904674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:4079912-4080142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:8981567-8981336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:10854144-10854374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:22719216-22718992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:23283276-23283044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:28477183-28477413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:30000024-29999793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:31691054-31691269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:34658596-34658822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr21:34835897-34835666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
336-598
               

               
Cow position:
               
chr21:31276284-31276542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
337-549
               

               
Cow position:
               
chr21:8071214-8071004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
337-549
               

               
Cow position:
               
chr21:28989171-28989392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
337-550
               

               
Cow position:
               
chr21:27613824-27614045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
337-560
               

               
Cow position:
               
chr21:5344243-5344445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
337-563
               

               
Cow position:
               
chr21:13585560-13585333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
337-563
               

               
Cow position:
               
chr21:28934928-28935161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr21:2877953-2877724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr21:4559184-4558957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr21:27230232-27230004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr21:32814258-32814021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr21:37517805-37517577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
337-565
               

               
Cow position:
               
chr21:20575901-20575666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 204
               

               
Conread position:
               
337-566
               

               
Cow position:
               
chr21:36711752-36711989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
337-572
               

               
Cow position:
               
chr21:43240423-43240656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
337-581
               

               
Cow position:
               
chr21:12075848-12075612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 135
               

               
Conread position:
               
338-564
               

               
Cow position:
               
chr21:13070304-13070073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
338-564
               

               
Cow position:
               
chr21:44281273-44281043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
340-563
               

               
Cow position:
               
chr21:2657157-2657378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
341-539
               

               
Cow position:
               
chr21:24111066-24110865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
341-550
               

               
Cow position:
               
chr21:15584837-15584625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
341-560
               

               
Cow position:
               
chr21:27036341-27036562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
341-563
               

               
Cow position:
               
chr21:7672685-7672920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
341-563
               

               
Cow position:
               
chr21:19436840-19436611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:81636-81858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:363216-363443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:2420068-2420293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:4732654-4732429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:10000726-10000501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:10777394-10777167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:15545798-15545577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:25344439-25344666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:27376013-27376237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:31252891-31253115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:32535548-32535764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:34251970-34251745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:47649234-47649455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr21:48484877-48484652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
341-569
               

               
Cow position:
               
chr21:29785705-29785943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 226
               

               
Conread position:
               
341-580
               

               
Cow position:
               
chr21:29855237-29855476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 224
               

               
Conread position:
               
341-581
               

               
Cow position:
               
chr21:24698040-24698284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
342-562
               

               
Cow position:
               
chr21:26681373-26681152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr21:45609-45834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr21:471187-471419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr21:3047228-3047452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr21:3236093-3236320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr21:20549358-20549130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr21:30896983-30897211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr21:42914178-42913958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
342-570
               

               
Cow position:
               
chr21:13163492-13163707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
147, 24
               

               
Conread position:
               
342-581
               

               
Cow position:
               
chr21:1058364-1058608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
343-543
               

               
Cow position:
               
chr21:30849372-30849177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
343-557
               

               
Cow position:
               
chr21:10263606-10263822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
343-564
               

               
Cow position:
               
chr21:14762949-14762722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 220
               

               
Conread position:
               
343-564
               

               
Cow position:
               
chr21:28768871-28768648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
344-522
               

               
Cow position:
               
chr21:26241106-26241287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
344-552
               

               
Cow position:
               
chr21:18828771-18828561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
344-563
               

               
Cow position:
               
chr21:27342017-27341807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
344-564
               

               
Cow position:
               
chr21:393588-393809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
344-564
               

               
Cow position:
               
chr21:7717221-7717000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
345-564
               

               
Cow position:
               
chr21:18494534-18494763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
346-567
               

               
Cow position:
               
chr21:28810681-28810457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
350-549
               

               
Cow position:
               
chr21:31661279-31661481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 189
               

               
Conread position:
               
356-564
               

               
Cow position:
               
chr21:27712857-27712648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
357-564
               

               
Cow position:
               
chr21:5455411-5455198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
359-569
               

               
Cow position:
               
chr21:24222958-24222747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
361-564
               

               
Cow position:
               
chr21:7564738-7564534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
362-564
               

               
Cow position:
               
chr21:9218520-9218718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr21:1179350-1179152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr21:8686647-8686449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr21:17411921-17411723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr21:17539320-17539518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr21:25738291-25738093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr21:30134705-30134900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 182
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr21:33245573-33245377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr21:39225032-39224834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
363-563
               

               
Cow position:
               
chr21:39700490-39700289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr21:9711129-9710926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr21:9981102-9980905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr21:10045823-10046024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr21:19702110-19702312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr21:33933798-33933596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
363-565
               

               
Cow position:
               
chr21:18818746-18818541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
363-571
               

               
Cow position:
               
chr21:16794926-16795134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 198
               

               
Conread position:
               
363-571
               

               
Cow position:
               
chr21:31039766-31039558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 198
               

               
Conread position:
               
363-580
               

               
Cow position:
               
chr21:13159116-13159333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
364-561
               

               
Cow position:
               
chr21:2495585-2495386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
365-564
               

               
Cow position:
               
chr21:35573296-35573099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
366-560
               

               
Cow position:
               
chr21:36225337-36225531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
366-562
               

               
Cow position:
               
chr21:31040850-31040653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
366-563
               

               
Cow position:
               
chr21:42464258-42464054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
366-564
               

               
Cow position:
               
chr21:37874106-37874306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
366-564
               

               
Cow position:
               
chr21:41957594-41957386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
366-564
               

               
Cow position:
               
chr21:45866527-45866724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
366-565
               

               
Cow position:
               
chr21:11195722-11195920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
123, 92
               

               
Conread position:
               
367-564
               

               
Cow position:
               
chr21:17478976-17479172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
367-564
               

               
Cow position:
               
chr21:36505646-36505450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
368-564
               

               
Cow position:
               
chr21:28914771-28914575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
369-564
               

               
Cow position:
               
chr21:8451437-8451633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
369-564
               

               
Cow position:
               
chr21:16278303-16278499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 34
               

               
Conread position:
               
370-549
               

               
Cow position:
               
chr21:48262723-48262909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
370-563
               

               
Cow position:
               
chr21:13897786-13897980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr21:9863031-9862833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr21:13300745-13300940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr21:21170353-21170154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr21:22856773-22856965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr21:30626585-30626395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
370-581
               

               
Cow position:
               
chr21:46973542-46973331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 205
               

               
Conread position:
               
371-552
               

               
Cow position:
               
chr21:23603738-23603919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
115, 97
               

               
Conread position:
               
371-564
               

               
Cow position:
               
chr21:24418388-24418190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
371-564
               

               
Cow position:
               
chr21:25475728-25475923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 174
               

               
Conread position:
               
372-560
               

               
Cow position:
               
chr21:2938624-2938813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
372-563
               

               
Cow position:
               
chr21:6102729-6102535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
372-564
               

               
Cow position:
               
chr21:39508041-39507853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
372-564
               

               
Cow position:
               
chr21:40013767-40013574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
372-564
               

               
Cow position:
               
chr21:45971550-45971370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
373-560
               

               
Cow position:
               
chr21:33993470-33993278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
373-563
               

               
Cow position:
               
chr21:26969-27164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
373-563
               

               
Cow position:
               
chr21:24796441-24796248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 180
               

               
Conread position:
               
373-563
               

               
Cow position:
               
chr21:25382594-25382785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
373-564
               

               
Cow position:
               
chr21:16695967-16696158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
373-564
               

               
Cow position:
               
chr21:36115929-36116118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 157
               

               
Conread position:
               
373-564
               

               
Cow position:
               
chr21:36995595-36995404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
374-560
               

               
Cow position:
               
chr21:25158491-25158677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
374-564
               

               
Cow position:
               
chr21:4541276-4541081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 78
               

               
Conread position:
               
374-564
               

               
Cow position:
               
chr21:19698962-19698778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
374-564
               

               
Cow position:
               
chr21:26736713-26736515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
374-580
               

               
Cow position:
               
chr21:1736172-1735959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 208
               

               
Conread position:
               
375-560
               

               
Cow position:
               
chr21:6863075-6862895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
375-563
               

               
Cow position:
               
chr21:23900208-23900020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
376-517
               

               
Cow position:
               
chr21:10118108-10118249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
377-564
               

               
Cow position:
               
chr21:44514867-44515053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
378-560
               

               
Cow position:
               
chr21:2709959-2709776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
380-563
               

               
Cow position:
               
chr21:13303133-13303316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
380-564
               

               
Cow position:
               
chr21:5153220-5153405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
380-564
               

               
Cow position:
               
chr21:7582300-7582117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
380-567
               

               
Cow position:
               
chr21:937657-937844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
381-564
               

               
Cow position:
               
chr21:2366945-2367128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
381-564
               

               
Cow position:
               
chr21:10071325-10071141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
382-564
               

               
Cow position:
               
chr21:46462796-46462977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 80
               

               
Conread position:
               
385-560
               

               
Cow position:
               
chr21:443640-443814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr21:21076736-21076913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 150
               

               
Conread position:
               
385-564
               

               
Cow position:
               
chr21:28923750-28923930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
385-564
               

               
Cow position:
               
chr21:42500642-42500819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
387-564
               

               
Cow position:
               
chr21:40244044-40244222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
390-560
               

               
Cow position:
               
chr21:35898008-35897836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
390-562
               

               
Cow position:
               
chr21:30904988-30904815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
390-564
               

               
Cow position:
               
chr21:7815104-7814923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
390-564
               

               
Cow position:
               
chr21:25042102-25042277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
390-564
               

               
Cow position:
               
chr21:29500520-29500694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
390-564
               

               
Cow position:
               
chr21:33263464-33263639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
391-563
               

               
Cow position:
               
chr21:12616758-12616929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
391-563
               

               
Cow position:
               
chr21:38867952-38867779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
391-564
               

               
Cow position:
               
chr21:15976255-15976428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 166
               

               
Conread position:
               
391-564
               

               
Cow position:
               
chr21:28881763-28881937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
392-563
               

               
Cow position:
               
chr21:46830531-46830356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
394-563
               

               
Cow position:
               
chr21:30232082-30231913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
397-564
               

               
Cow position:
               
chr21:16789341-16789509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
397-564
               

               
Cow position:
               
chr21:31158874-31159042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
397-570
               

               
Cow position:
               
chr21:37297692-37297522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
398-532
               

               
Cow position:
               
chr21:49702633-49702498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
398-563
               

               
Cow position:
               
chr21:28910081-28909916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
398-564
               

               
Cow position:
               
chr21:16612250-16612417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
398-564
               

               
Cow position:
               
chr21:44108642-44108797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
399-564
               

               
Cow position:
               
chr21:4794843-4795010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
399-564
               

               
Cow position:
               
chr21:45916082-45915916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
401-564
               

               
Cow position:
               
chr21:17262488-17262328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
88, 130
               

               
Conread position:
               
403-560
               

               
Cow position:
               
chr21:25480215-25480373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
403-560
               

               
Cow position:
               
chr21:39672300-39672458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
403-560
               

               
Cow position:
               
chr21:39674965-39675124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
404-560
               

               
Cow position:
               
chr21:9743952-9743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
404-560
               

               
Cow position:
               
chr21:33154951-33155108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
404-564
               

               
Cow position:
               
chr21:14125689-14125851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
405-571
               

               
Cow position:
               
chr21:30688561-30688395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
406-539
               

               
Cow position:
               
chr21:13315879-13316012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
406-564
               

               
Cow position:
               
chr21:24136547-24136706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
406-564
               

               
Cow position:
               
chr21:40267199-40267040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
407-564
               

               
Cow position:
               
chr21:23984653-23984496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
409-563
               

               
Cow position:
               
chr21:10642233-10642387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
409-564
               

               
Cow position:
               
chr21:45151999-45151843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
410-564
               

               
Cow position:
               
chr21:19668756-19668605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
411-560
               

               
Cow position:
               
chr21:24236747-24236897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
411-564
               

               
Cow position:
               
chr21:19363816-19363662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
411-571
               

               
Cow position:
               
chr21:27500429-27500589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
411-581
               

               
Cow position:
               
chr21:32574358-32574532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
412-560
               

               
Cow position:
               
chr21:21963113-21963262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
412-564
               

               
Cow position:
               
chr21:4399435-4399588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
412-564
               

               
Cow position:
               
chr21:46777338-46777185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
413-564
               

               
Cow position:
               
chr21:16909691-16909843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
413-564
               

               
Cow position:
               
chr21:42136208-42136063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
413-568
               

               
Cow position:
               
chr21:21964667-21964823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
414-560
               

               
Cow position:
               
chr21:5790862-5791009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
414-560
               

               
Cow position:
               
chr21:36973177-36973030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
414-564
               

               
Cow position:
               
chr21:9415880-9416030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
414-564
               

               
Cow position:
               
chr21:14238191-14238342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
414-571
               

               
Cow position:
               
chr21:11024353-11024196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 147
               

               
Conread position:
               
417-564
               

               
Cow position:
               
chr21:17370243-17370095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
417-564
               

               
Cow position:
               
chr21:23586503-23586650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
417-564
               

               
Cow position:
               
chr21:30990626-30990480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
420-563
               

               
Cow position:
               
chr21:37479602-37479746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
420-564
               

               
Cow position:
               
chr21:2984148-2984003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
420-564
               

               
Cow position:
               
chr21:23821813-23821956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
420-564
               

               
Cow position:
               
chr21:25193438-25193583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
421-564
               

               
Cow position:
               
chr21:41032925-41033072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
422-560
               

               
Cow position:
               
chr21:26071507-26071368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
422-564
               

               
Cow position:
               
chr21:20162180-20162323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
422-571
               

               
Cow position:
               
chr21:4665839-4665690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 139
               

               
Conread position:
               
426-555
               

               
Cow position:
               
chr21:27124757-27124630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
426-563
               

               
Cow position:
               
chr21:28029047-28029184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
429-561
               

               
Cow position:
               
chr21:5137855-5137722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
433-564
               

               
Cow position:
               
chr21:641243-641372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
435-563
               

               
Cow position:
               
chr21:17616658-17616529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
440-564
               

               
Cow position:
               
chr21:13048533-13048408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
445-564
               

               
Cow position:
               
chr21:8985217-8985337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
446-564
               

               
Cow position:
               
chr21:35823220-35823102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
447-564
               

               
Cow position:
               
chr21:24857981-24858099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
449-564
               

               
Cow position:
               
chr21:38120775-38120891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
453-564
               

               
Cow position:
               
chr21:11645309-11645197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
453-564
               

               
Cow position:
               
chr21:47760453-47760565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
463-564
               

               
Cow position:
               
chr21:31702270-31702168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.