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Cow genome map

           
Conread name:
           
Ss1.1-recc2810c_k5.5
        

               
Conread position:
               
163-293
               

               
Cow position:
               
chr29:4885587-4885458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
202-564
               

               
Cow position:
               
chr29:29929157-29929520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
290-564
               

               
Cow position:
               
chr29:1324883-1325164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
317-474
               

               
Cow position:
               
chr29:34429837-34429997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
317-539
               

               
Cow position:
               
chr29:18879194-18878970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
317-549
               

               
Cow position:
               
chr29:16097836-16097605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr29:40762573-40762822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 122
               

               
Conread position:
               
317-560
               

               
Cow position:
               
chr29:1479156-1479402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
317-560
               

               
Cow position:
               
chr29:13101614-13101860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
317-560
               

               
Cow position:
               
chr29:31185081-31185326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 232
               

               
Conread position:
               
317-562
               

               
Cow position:
               
chr29:38229705-38229954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-563
               

               
Cow position:
               
chr29:8623531-8623281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:528815-528567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:2837586-2837335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:5550475-5550723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:6261842-6261597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 152
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:7666558-7666306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:7866089-7865840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:13107812-13108061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:17408809-17409057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:19619564-19619316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 172
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:23239987-23240236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:26161125-26160874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:29065900-29066149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 229
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:39075731-39075480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:40096437-40096688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:40498175-40497924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
317-564
               

               
Cow position:
               
chr29:43327500-43327746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 212
               

               
Conread position:
               
317-565
               

               
Cow position:
               
chr29:8681476-8681227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
317-567
               

               
Cow position:
               
chr29:7811493-7811239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
318-564
               

               
Cow position:
               
chr29:27007598-27007842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
318-564
               

               
Cow position:
               
chr29:35076836-35077086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
319-564
               

               
Cow position:
               
chr29:15944046-15944292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
12, 147
               

               
Conread position:
               
322-560
               

               
Cow position:
               
chr29:18751946-18752185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
325-563
               

               
Cow position:
               
chr29:35739016-35738782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
325-564
               

               
Cow position:
               
chr29:11684484-11684728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
327-473
               

               
Cow position:
               
chr29:40117039-40117185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
327-522
               

               
Cow position:
               
chr29:21199539-21199342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-547
               

               
Cow position:
               
chr29:11696018-11696246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
327-549
               

               
Cow position:
               
chr29:33599621-33599397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-556
               

               
Cow position:
               
chr29:15698740-15698509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-558
               

               
Cow position:
               
chr29:606931-606698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-558
               

               
Cow position:
               
chr29:21227692-21227925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
327-558
               

               
Cow position:
               
chr29:28656657-28656425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 177
               

               
Conread position:
               
327-558
               

               
Cow position:
               
chr29:29565622-29565390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
327-559
               

               
Cow position:
               
chr29:32556030-32555796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:292204-292439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:735054-734819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:756919-756684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:1688451-1688686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:2401071-2401306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:2402403-2402638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:2521063-2521300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:3330299-3330534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:4611078-4611312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:5426137-5425906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:5935676-5935911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:6413998-6414233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:6455362-6455597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:6879218-6878980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:7848108-7848342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:9641638-9641873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:10031936-10031701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:10122620-10122386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:10145760-10145525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:11118995-11118760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:11696932-11697167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:12898275-12898510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:13128433-13128198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:13623657-13623422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:14569013-14569248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:15116811-15116575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:15251566-15251801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:15570251-15570486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:15755450-15755215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:15767909-15767674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:15936778-15936544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
38, 185
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:15965837-15965602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:16035681-16035446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:16065426-16065661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:16067069-16067304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:16185062-16184827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:16382339-16382573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:16785394-16785629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:18011288-18011523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:18300202-18300437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:20014571-20014336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:20055128-20055363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:20213278-20213512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:20593448-20593683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:21231365-21231130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:22341229-22341464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:24982854-24982619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:26987048-26987283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:27702794-27703027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:27928180-27927945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:30708064-30707829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:31093845-31093610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:31765756-31765992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:32292311-32292543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:32298441-32298676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:32317579-32317810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 132
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:32329543-32329308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:32353312-32353547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:32378288-32378523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:32516210-32516444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 205
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:35264651-35264416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:35735903-35735668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:38409913-38410148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:38672376-38672141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:39047817-39048052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr29:40157461-40157696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-562
               

               
Cow position:
               
chr29:45583318-45583085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
327-563
               

               
Cow position:
               
chr29:8667297-8667532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 198
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr29:727446-727684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 234
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr29:2463218-2462986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr29:3574882-3574644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 209
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr29:4326980-4327218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr29:9079087-9078850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 172
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr29:19857174-19857414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
327-564
               

               
Cow position:
               
chr29:24728584-24728345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
327-566
               

               
Cow position:
               
chr29:16042386-16042626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 235
               

               
Conread position:
               
327-567
               

               
Cow position:
               
chr29:13585921-13586162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr29:527120-526875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr29:4620661-4620906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr29:18561313-18561068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-571
               

               
Cow position:
               
chr29:34865304-34865549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
327-572
               

               
Cow position:
               
chr29:31943330-31943575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
327-581
               

               
Cow position:
               
chr29:19524424-19524170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
329-552
               

               
Cow position:
               
chr29:23154713-23154937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
329-564
               

               
Cow position:
               
chr29:44902216-44901979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
329-566
               

               
Cow position:
               
chr29:21665461-21665699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
35, 236
               

               
Conread position:
               
330-522
               

               
Cow position:
               
chr29:32175977-32176166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
330-541
               

               
Cow position:
               
chr29:28775968-28775748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
330-547
               

               
Cow position:
               
chr29:18364921-18364702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-549
               

               
Cow position:
               
chr29:40300480-40300259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
330-551
               

               
Cow position:
               
chr29:26130281-26130503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
330-560
               

               
Cow position:
               
chr29:1743219-1743451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
330-560
               

               
Cow position:
               
chr29:39214130-39213898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-562
               

               
Cow position:
               
chr29:10156799-10156568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr29:984350-984586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr29:9717139-9717374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr29:19761762-19761997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr29:21535204-21534968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 180
               

               
Conread position:
               
330-563
               

               
Cow position:
               
chr29:37617642-37617877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:254543-254782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:457559-457323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:649750-649991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:686704-686468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:3973058-3972828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:4001905-4002141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:4875418-4875180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:5187293-5187062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
160, 30
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:6333040-6333270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:6334279-6334509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:6871554-6871313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:6925505-6925745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:7956478-7956243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 199
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:9137786-9138026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:9911643-9911885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:13027923-13028158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:16185948-16185712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:17132131-17131894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:17153968-17154208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:19792779-19792544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:20933200-20933428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:21443859-21443621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:26263341-26263578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:32290090-32290325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:34746167-34745931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:35291594-35291822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:35434357-35434593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:36209415-36209651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:36530350-36530586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 203
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr29:43009625-43009389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
330-565
               

               
Cow position:
               
chr29:32732821-32733054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 216
               

               
Conread position:
               
330-566
               

               
Cow position:
               
chr29:19338447-19338685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-566
               

               
Cow position:
               
chr29:24578340-24578577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
330-569
               

               
Cow position:
               
chr29:18749095-18748853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-571
               

               
Cow position:
               
chr29:13923798-13924040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
330-571
               

               
Cow position:
               
chr29:18085062-18085306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
330-576
               

               
Cow position:
               
chr29:42939851-42939598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
330-578
               

               
Cow position:
               
chr29:2984343-2984592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
330-579
               

               
Cow position:
               
chr29:5948307-5948053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
330-581
               

               
Cow position:
               
chr29:2624026-2623776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
330-600
               

               
Cow position:
               
chr29:23348734-23348465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
331-459
               

               
Cow position:
               
chr29:24080410-24080540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
331-564
               

               
Cow position:
               
chr29:4057994-4058236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
331-564
               

               
Cow position:
               
chr29:17794900-17795143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
331-564
               

               
Cow position:
               
chr29:19251753-19251987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
331-569
               

               
Cow position:
               
chr29:27858299-27858541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
332-560
               

               
Cow position:
               
chr29:4164527-4164757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
332-561
               

               
Cow position:
               
chr29:3501880-3502114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
332-564
               

               
Cow position:
               
chr29:28621780-28621547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
334-562
               

               
Cow position:
               
chr29:45820748-45820526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
335-472
               

               
Cow position:
               
chr29:478615-478753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-525
               

               
Cow position:
               
chr29:43371961-43371769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
335-543
               

               
Cow position:
               
chr29:4755532-4755320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
335-550
               

               
Cow position:
               
chr29:21933641-21933417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-560
               

               
Cow position:
               
chr29:14610970-14611197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-560
               

               
Cow position:
               
chr29:16152302-16152528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 176
               

               
Conread position:
               
335-560
               

               
Cow position:
               
chr29:19925261-19925034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-561
               

               
Cow position:
               
chr29:6150575-6150341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-562
               

               
Cow position:
               
chr29:4120345-4120573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr29:44001-43771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr29:15756896-15757130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr29:16012248-16012020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr29:20429470-20429247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr29:24659608-24659378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr29:26778382-26778613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 199
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr29:36586069-36586302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 211
               

               
Conread position:
               
335-563
               

               
Cow position:
               
chr29:43499975-43499745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:961418-961642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:2188857-2188626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:2308771-2309003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:2694425-2694657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:2744778-2744549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:5238210-5238441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:5241120-5241351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:7427416-7427187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:8589012-8588781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:9332637-9332867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:10819990-10819759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:11136395-11136165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:11365740-11365980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:11588750-11588982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:13639858-13639630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
151, 32
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:14116537-14116765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:16347936-16348165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:16609233-16609461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:19514614-19514383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:20244782-20245009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:20254888-20255119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:22935779-22936004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:23980452-23980683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:25927062-25926831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:28506575-28506811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 181
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:28578865-28579095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 223
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:28696669-28696445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 167
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:28990448-28990668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:32644401-32644638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:32808092-32808320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:34780260-34780032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:34806111-34805879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:38247260-38247022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:39332090-39331853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:45208222-45208451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 215
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr29:45462956-45463186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
335-566
               

               
Cow position:
               
chr29:1021760-1021993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
335-566
               

               
Cow position:
               
chr29:16187180-16187407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 196
               

               
Conread position:
               
335-566
               

               
Cow position:
               
chr29:19428159-19428398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
335-580
               

               
Cow position:
               
chr29:42204979-42205231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 207
               

               
Conread position:
               
335-581
               

               
Cow position:
               
chr29:24345972-24345726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
116, 233
               

               
Conread position:
               
335-581
               

               
Cow position:
               
chr29:24669433-24669684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 174
               

               
Conread position:
               
335-581
               

               
Cow position:
               
chr29:34878115-34878370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 206
               

               
Conread position:
               
336-491
               

               
Cow position:
               
chr29:10236933-10236777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-549
               

               
Cow position:
               
chr29:26285535-26285320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
336-549
               

               
Cow position:
               
chr29:26334891-26334677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
336-549
               

               
Cow position:
               
chr29:27008691-27008905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
336-563
               

               
Cow position:
               
chr29:13127612-13127388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:2103567-2103797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:3584631-3584402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:4201612-4201842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:6935209-6935438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:13458488-13458717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:13553634-13553868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:15738852-15738621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:18025914-18026148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:21592206-21592427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:24730781-24730561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:29056673-29056906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:31786180-31786401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
336-564
               

               
Cow position:
               
chr29:45006123-45005893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-566
               

               
Cow position:
               
chr29:15902797-15902566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
336-593
               

               
Cow position:
               
chr29:3549257-3549518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
337-539
               

               
Cow position:
               
chr29:7290409-7290606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
337-549
               

               
Cow position:
               
chr29:17117426-17117640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
337-560
               

               
Cow position:
               
chr29:15401262-15401037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
337-560
               

               
Cow position:
               
chr29:19891289-19891514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
337-562
               

               
Cow position:
               
chr29:42807707-42807930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 130
               

               
Conread position:
               
337-563
               

               
Cow position:
               
chr29:43729564-43729790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr29:87518-87294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr29:8136759-8136523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr29:8190978-8190756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr29:10452082-10451844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr29:13017896-13017667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr29:13590216-13589988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr29:29303406-29303172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
337-564
               

               
Cow position:
               
chr29:34774369-34774140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
338-558
               

               
Cow position:
               
chr29:25775552-25775330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
338-591
               

               
Cow position:
               
chr29:36633339-36633086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 222
               

               
Conread position:
               
339-564
               

               
Cow position:
               
chr29:36007890-36008116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 222
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr29:14050715-14050491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr29:16501382-16501608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr29:32800203-32799984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr29:38349630-38349405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr29:39567186-39567409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
341-564
               

               
Cow position:
               
chr29:44379129-44378904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
342-540
               

               
Cow position:
               
chr29:36428786-36428586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
342-547
               

               
Cow position:
               
chr29:798999-798785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr29:4480663-4480451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
342-564
               

               
Cow position:
               
chr29:44233439-44233226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
343-473
               

               
Cow position:
               
chr29:18212498-18212363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
343-562
               

               
Cow position:
               
chr29:465898-465678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
343-563
               

               
Cow position:
               
chr29:42406172-42406385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
343-564
               

               
Cow position:
               
chr29:17077738-17077960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 193
               

               
Conread position:
               
343-564
               

               
Cow position:
               
chr29:37719407-37719635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
344-563
               

               
Cow position:
               
chr29:12222173-12221956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
344-563
               

               
Cow position:
               
chr29:29770985-29770763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
344-564
               

               
Cow position:
               
chr29:6775484-6775267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
344-564
               

               
Cow position:
               
chr29:34551953-34552175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
344-567
               

               
Cow position:
               
chr29:4692315-4692086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
347-572
               

               
Cow position:
               
chr29:40764165-40763941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
350-564
               

               
Cow position:
               
chr29:3539750-3539531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
350-564
               

               
Cow position:
               
chr29:10225524-10225303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
352-570
               

               
Cow position:
               
chr29:41812063-41811846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
354-560
               

               
Cow position:
               
chr29:38261746-38261539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
359-552
               

               
Cow position:
               
chr29:6648783-6648976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
127, 103
               

               
Conread position:
               
359-564
               

               
Cow position:
               
chr29:732140-732349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
359-564
               

               
Cow position:
               
chr29:24013250-24013457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
5, 102
               

               
Conread position:
               
360-560
               

               
Cow position:
               
chr29:6774320-6774119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
360-564
               

               
Cow position:
               
chr29:7799330-7799539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
363-539
               

               
Cow position:
               
chr29:31594549-31594371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
363-543
               

               
Cow position:
               
chr29:7724423-7724605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
363-549
               

               
Cow position:
               
chr29:5233124-5233303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 92
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr29:1911890-1911692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr29:21168034-21168230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
363-560
               

               
Cow position:
               
chr29:38271761-38271959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
363-562
               

               
Cow position:
               
chr29:18963254-18963464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
363-563
               

               
Cow position:
               
chr29:42709254-42709053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:355470-355662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:10819144-10818938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 176
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:18012119-18012322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:20539226-20539018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:24121336-24121136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:32963057-32963263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:38910488-38910281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:40014176-40013977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
363-564
               

               
Cow position:
               
chr29:41113327-41113122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
363-565
               

               
Cow position:
               
chr29:11433465-11433668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 195
               

               
Conread position:
               
363-569
               

               
Cow position:
               
chr29:9638791-9638582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
364-564
               

               
Cow position:
               
chr29:1934038-1933837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
364-564
               

               
Cow position:
               
chr29:19755969-19756171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
365-563
               

               
Cow position:
               
chr29:10674538-10674736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
366-560
               

               
Cow position:
               
chr29:7953586-7953781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
366-563
               

               
Cow position:
               
chr29:10296983-10296785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
366-563
               

               
Cow position:
               
chr29:27833513-27833709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
366-564
               

               
Cow position:
               
chr29:4084591-4084789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 160
               

               
Conread position:
               
366-564
               

               
Cow position:
               
chr29:4537584-4537789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
366-564
               

               
Cow position:
               
chr29:14372756-14372551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
367-560
               

               
Cow position:
               
chr29:21209691-21209885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
367-560
               

               
Cow position:
               
chr29:26633766-26633572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
367-564
               

               
Cow position:
               
chr29:26289560-26289363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr29:629164-629350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 96
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr29:4519495-4519690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
370-564
               

               
Cow position:
               
chr29:12005237-12005041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
370-571
               

               
Cow position:
               
chr29:21475209-21475410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
119, 191
               

               
Conread position:
               
371-534
               

               
Cow position:
               
chr29:5062686-5062850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
371-552
               

               
Cow position:
               
chr29:2415278-2415096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
371-562
               

               
Cow position:
               
chr29:30545481-30545289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
371-564
               

               
Cow position:
               
chr29:2136576-2136376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
371-564
               

               
Cow position:
               
chr29:22949140-22948940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
371-564
               

               
Cow position:
               
chr29:23988322-23988520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 169
               

               
Conread position:
               
371-564
               

               
Cow position:
               
chr29:36216650-36216842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
372-564
               

               
Cow position:
               
chr29:34793807-34793611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
373-528
               

               
Cow position:
               
chr29:17561-17406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 86
               

               
Conread position:
               
373-560
               

               
Cow position:
               
chr29:2145376-2145188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
374-571
               

               
Cow position:
               
chr29:43495599-43495798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
19, 155
               

               
Conread position:
               
377-564
               

               
Cow position:
               
chr29:11309178-11308989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
377-564
               

               
Cow position:
               
chr29:16612423-16612229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
377-564
               

               
Cow position:
               
chr29:32942768-32942954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
377-570
               

               
Cow position:
               
chr29:34736918-34736716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 197
               

               
Conread position:
               
381-564
               

               
Cow position:
               
chr29:12674681-12674864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
385-558
               

               
Cow position:
               
chr29:5952425-5952251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
385-564
               

               
Cow position:
               
chr29:2544069-2544249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
385-564
               

               
Cow position:
               
chr29:13848392-13848213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 119
               

               
Conread position:
               
386-564
               

               
Cow position:
               
chr29:37618711-37618890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
387-564
               

               
Cow position:
               
chr29:16168491-16168314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
387-564
               

               
Cow position:
               
chr29:43517178-43517000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
390-552
               

               
Cow position:
               
chr29:11321800-11321636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
390-560
               

               
Cow position:
               
chr29:16109906-16110077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
390-564
               

               
Cow position:
               
chr29:24952229-24952409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
391-560
               

               
Cow position:
               
chr29:24616181-24616352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
391-564
               

               
Cow position:
               
chr29:11915086-11915257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
392-564
               

               
Cow position:
               
chr29:20903868-20903699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
393-564
               

               
Cow position:
               
chr29:12309550-12309720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
394-560
               

               
Cow position:
               
chr29:13876636-13876469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
394-562
               

               
Cow position:
               
chr29:21528856-21529023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
396-564
               

               
Cow position:
               
chr29:21197097-21196927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
397-563
               

               
Cow position:
               
chr29:5109725-5109558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
402-564
               

               
Cow position:
               
chr29:19398743-19398906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
403-528
               

               
Cow position:
               
chr29:16195390-16195515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
403-560
               

               
Cow position:
               
chr29:5786489-5786647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
403-560
               

               
Cow position:
               
chr29:9861306-9861150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
403-560
               

               
Cow position:
               
chr29:15808536-15808695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
403-560
               

               
Cow position:
               
chr29:23449040-23448882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
403-560
               

               
Cow position:
               
chr29:26450071-26449912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
404-537
               

               
Cow position:
               
chr29:27005447-27005581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
404-560
               

               
Cow position:
               
chr29:21428021-21427864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
404-563
               

               
Cow position:
               
chr29:34298186-34298026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
404-563
               

               
Cow position:
               
chr29:42821348-42821506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
404-564
               

               
Cow position:
               
chr29:6755525-6755367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
404-564
               

               
Cow position:
               
chr29:7560839-7560678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
404-564
               

               
Cow position:
               
chr29:27835783-27835943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
405-564
               

               
Cow position:
               
chr29:16209585-16209426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
406-564
               

               
Cow position:
               
chr29:18521486-18521322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
406-564
               

               
Cow position:
               
chr29:32543914-32544073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
407-564
               

               
Cow position:
               
chr29:903497-903655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
407-564
               

               
Cow position:
               
chr29:23112925-23113083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
408-564
               

               
Cow position:
               
chr29:19659621-19659778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
410-534
               

               
Cow position:
               
chr29:6286799-6286674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
410-564
               

               
Cow position:
               
chr29:24623811-24623964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
410-564
               

               
Cow position:
               
chr29:26415577-26415737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
410-564
               

               
Cow position:
               
chr29:32308754-32308601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
411-543
               

               
Cow position:
               
chr29:27588261-27588393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
411-549
               

               
Cow position:
               
chr29:42253942-42253803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
411-560
               

               
Cow position:
               
chr29:2483673-2483523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
411-560
               

               
Cow position:
               
chr29:9977492-9977342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
411-564
               

               
Cow position:
               
chr29:17606985-17607139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
411-564
               

               
Cow position:
               
chr29:41183170-41183016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
411-566
               

               
Cow position:
               
chr29:8935054-8935210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
411-580
               

               
Cow position:
               
chr29:25088303-25088472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 157
               

               
Conread position:
               
412-564
               

               
Cow position:
               
chr29:17109542-17109691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
414-560
               

               
Cow position:
               
chr29:18724183-18724037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
414-560
               

               
Cow position:
               
chr29:40306428-40306281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
416-563
               

               
Cow position:
               
chr29:44235792-44235937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
417-549
               

               
Cow position:
               
chr29:27824132-27824260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
417-560
               

               
Cow position:
               
chr29:12571012-12571156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
417-560
               

               
Cow position:
               
chr29:35455394-35455250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
417-564
               

               
Cow position:
               
chr29:35281078-35281226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
418-564
               

               
Cow position:
               
chr29:26017934-26017788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
419-560
               

               
Cow position:
               
chr29:2484872-2485014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
420-560
               

               
Cow position:
               
chr29:4649142-4649001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
420-564
               

               
Cow position:
               
chr29:24260258-24260114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-564
               

               
Cow position:
               
chr29:26915757-26915902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
420-564
               

               
Cow position:
               
chr29:28689188-28689333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chr29:42413746-42413886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
422-560
               

               
Cow position:
               
chr29:37485971-37486110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
423-564
               

               
Cow position:
               
chr29:11072113-11071965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
426-560
               

               
Cow position:
               
chr29:25824532-25824667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
426-564
               

               
Cow position:
               
chr29:12610913-12611052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
431-564
               

               
Cow position:
               
chr29:8126005-8125870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
435-552
               

               
Cow position:
               
chr29:2532721-2532839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
438-563
               

               
Cow position:
               
chr29:28637463-28637339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
447-564
               

               
Cow position:
               
chr29:29632332-29632214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
447-572
               

               
Cow position:
               
chr29:29589309-29589184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 118
               
Show alignments to all cow chromosomes.