Cow genome map

Conread name: Ss1.1-recc2821c_h13.5

Conread position: 177-337
Cow position: chr18:50062932-50062775 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 199-337
Cow position: chr18:53618512-53618374 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 199-337
Cow position: chr18:56332275-56332137 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 203-337
Cow position: chr18:43068522-43068388 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 206-337
Cow position: chr18:50095779-50095910 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 206-337
Cow position: chr18:55506811-55506680 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 206-337
Cow position: chr18:55531947-55531816 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-331
Cow position: chr18:14458824-14458700 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:1414852-1414982 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:41956381-41956251 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:42754455-42754325 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:42785435-42785565 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:43143693-43143823 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:44411449-44411319 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 114

Conread position: 207-337
Cow position: chr18:50033976-50033846 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:50052085-50051955 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:50077706-50077836 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:50244331-50244461 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:53646080-53645950 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 207-337
Cow position: chr18:55954137-55954267 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 208-337
Cow position: chr18:42073787-42073916 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 208-337
Cow position: chr18:42699257-42699127 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 208-337
Cow position: chr18:43124993-43124864 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 208-337
Cow position: chr18:50842872-50843001 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 208-337
Cow position: chr18:52015248-52015119 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 208-368
Cow position: chr18:42728293-42728129 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 131, 0

Conread position: 215-337
Cow position: chr18:41193473-41193596 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 216-337
Cow position: chr18:42822254-42822375 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 217-337
Cow position: chr18:51819663-51819543 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 217-337
Cow position: chr18:51844467-51844347 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 220-331
Cow position: chr18:50267454-50267565 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 220-331
Cow position: chr18:50278859-50278970 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.