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Cow genome map

           
Conread name:
           
Ss1.1-recc2831c_b18.5
        

               
Conread position:
               
1-89
               

               
Cow position:
               
chr14:23645273-23645185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-96
               

               
Cow position:
               
chr14:26859388-26859483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-102
               

               
Cow position:
               
chr14:10515758-10515857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr14:15314121-15314008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr14:45046306-45046423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr14:10721138-10721258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr14:19343006-19343133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr14:12201941-12202070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr14:11468822-11468952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr14:41179854-41179715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr14:21538123-21538265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr14:33516084-33516230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr14:8396220-8396072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr14:19773124-19773272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr14:37236833-37236688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr14:38811715-38811568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr14:10697170-10697323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr14:13723241-13723402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr14:46435469-46435632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr14:8864198-8864028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr14:11461532-11461362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr14:15918132-15918303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr14:47486059-47485889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr14:13869203-13869030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr14:28291264-28291093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr14:40284261-40284086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr14:48359983-48359802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr14:23080166-23080342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr14:5315739-5315552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr14:13464905-13465088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr14:3948711-3948906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:16342082-16342278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:34395312-34395502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr14:6246506-6246704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr14:15904767-15904965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr14:16996183-16995985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr14:23253794-23253595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr14:46960946-46961145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr14:22982247-22982042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr14:33462514-33462319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr14:49994987-49994786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr14:50068703-50068501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr14:21047926-21047723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr14:14764522-14764727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr14:41749405-41749601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr14:44026257-44026052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr14:45848721-45848925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr14:48427435-48427230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:1602573-1602779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:5144506-5144712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:5200365-5200571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:6467141-6467347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:7338359-7338153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 99
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:8989235-8989442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:9033491-9033285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:10685622-10685416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:10867573-10867367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:12857948-12857742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:12991370-12991576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:13297051-13296849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:13634347-13634553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:14245677-14245484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:17527123-17527329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:21015700-21015494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:22103086-22102880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:22612317-22612111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:23215048-23214842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:23322680-23322886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:30433054-30433260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 125
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:30927365-30927159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:31156385-31156591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:31333631-31333837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:33289175-33289381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:34626342-34626548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:34760546-34760752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:39327507-39327713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:40483921-40484127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:41148883-41148677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:47507463-47507257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:47954264-47954470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:48523991-48524197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:49590245-49590039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr14:1706635-1706430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr14:11056573-11056369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr14:18694175-18693969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:3107275-3107483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 114
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:5532899-5533108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:7476563-7476768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:11150356-11150148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:12739489-12739282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:12834398-12834605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:13768735-13768527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:18448654-18448854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:20786941-20787151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:27394778-27394986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:34667004-34666796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:37227751-37227955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:39891625-39891417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:46074945-46074737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr14:14589261-14589466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr14:45191421-45191630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:16525234-16525027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:19189396-19189188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:10541322-10541109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:12488331-12488548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 160
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:35079646-35079444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:40721571-40721777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:25993333-25993540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:39877253-39877456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:7647679-7647888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
101, 169
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:11982012-11981802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
203, 160
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:37151281-37151502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:43792719-43792506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
205, 80
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:7599859-7600072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:19350683-19350465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
155, 80
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:39616552-39616765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:44294177-44294391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr14:38239930-38239720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr14:46549727-46549941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:21346584-21346366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:25885860-25885645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:25991686-25991904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:33077669-33077451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:35016963-35017179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
204, 38
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:18191563-18191783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:22989393-22989177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:34096233-34096448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr14:11146821-11147043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
204, 220
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr14:36167294-36167077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 147
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr14:9448983-9448756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr14:42596736-42596516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr14:10311149-10311377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr14:15054635-15054854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr14:403718-403947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr14:17761842-17761613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr14:28137917-28137688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr14:47871255-47871026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr14:49063799-49064028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr14:8982215-8982438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr14:40198901-40199128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
204, 153
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:5645968-5646199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:9110374-9110599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
204, 137
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:20454989-20454758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:34907085-34907316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:35266655-35266884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
204, 155
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:35338113-35338342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
204, 120
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:193708-193934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
204, 155
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:8884334-8884100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 88
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:27039831-27039600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
204, 80
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:28131851-28132081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:33226062-33225830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:33667965-33668194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
216, 40
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:34675657-34675889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:47583047-47582815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:48164508-48164280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:48250897-48250665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr14:6554779-6555006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
216, 132
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr14:8829759-8829989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
204, 132
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr14:32500842-32501076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
204, 232
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:11473765-11473529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:14082124-14081888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:17094293-17094529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:19551043-19551279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:21534688-21534908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:26116422-26116187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
204, 148
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:27865779-27866011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
203, 45
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:30580905-30580671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
204, 155
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:36775959-36775732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:38169035-38168809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:39618026-39618249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
216, 27
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:45603925-45603686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
110, 106
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:46220700-46220464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:48571794-48571558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:19818734-19818497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
204, 80
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr14:35509616-35509851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
207, 80
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:1796650-1796405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr14:27791889-27791641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:10907078-10906827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:11509000-11509251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:13859990-13859742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
216, 129
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:15335915-15335665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
212, 185
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:17485594-17485343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:19533534-19533282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:21762661-21762912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:23055963-23055717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 124
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:24972827-24972576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:28197025-28197275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
204, 98
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:31399941-31399683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:32276960-32276709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:33426003-33425747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:34345707-34345456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:34894880-34894629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:35588512-35588270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
216, 32
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:36952950-36952699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:37640591-37640347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:38047736-38047987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:38436573-38436824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:38461174-38461425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:40969713-40969963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
204, 238
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:41325080-41325325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:42918457-42918201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:43249943-43249691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
208, 64
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:43452821-43453073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:43561724-43561978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 89
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:46124901-46125158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:46848486-46848235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:49221682-49221933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
163, 153
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr14:15781570-15781826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:8997703-8997448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:21201470-21201731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:31130030-31130271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr14:19193662-19193912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr14:18940952-18941198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
203, 14
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr14:24894116-24893859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
202, 50
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:1727705-1727966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:8495505-8495254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:15271705-15271446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
204, 97
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:17755918-17755662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
82, 151
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:19323730-19323470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 106
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:22026220-22025957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:26034157-26033895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:27254407-27254155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:28992793-28992532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:29973017-29972754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:31734497-31734750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
214, 40
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:44237341-44237604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
163, 169
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:45042552-45042292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr14:50114900-50115161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 98
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr14:6490343-6490605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr14:12616673-12616943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr14:46391336-46391070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
203, 98
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:3878811-3878547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:12903877-12904147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
204, 175
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:17690685-17690954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:18666159-18666431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:30664360-30664088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 139
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:31683372-31683100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:32583475-32583203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:39710721-39710992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
204, 80
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:40201418-40201684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
204, 154
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:44700857-44700585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr14:47588698-47588427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr14:28796029-28795763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
262, 35
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr14:35047931-35047664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr14:38865650-38865378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
172, 254
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr14:44368233-44368503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
204, 252
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr14:28988050-28987781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
260, 86
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr14:5501793-5502077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
208, 244
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr14:20016349-20016620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
202, 25
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr14:20467754-20468022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 98
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr14:44382841-44383119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
202, 99
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr14:44742028-44742299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
204, 84
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr14:7317195-7316911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 254
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr14:8784534-8784268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
260, 79
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr14:12249838-12250113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr14:19633539-19633263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
259, 48
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr14:28090616-28090892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
218, 48
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:8964907-8964631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:9020381-9020110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
191, 29
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:9901530-9901261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:12483952-12484217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:22583497-22583230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:34199484-34199766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:36554797-36555073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:37156226-37155959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
200, 12
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:49563312-49563577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
262, 59
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr14:21964475-21964198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:6418959-6419226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
260, 76
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:7270657-7270930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
261, 154
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:19222239-19221959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:19618400-19618672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:19863089-19863355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
202, 17
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:22381195-22381474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:28378720-28378438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
205, 40
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:29772128-29771848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
212, 140
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:33828503-33828238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:47484056-47483771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 229
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:50137827-50138113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr14:42330711-42330427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
207, 11
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr14:50363155-50362870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 89
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr14:18308951-18309228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr14:25403587-25403867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
285, 17
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr14:25779455-25779165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 254
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr14:38921292-38921018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr14:7558080-7558369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
202, 30
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr14:8754683-8754392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 59
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr14:39774697-39775004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 48
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:20640262-20640584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
87, 219
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:26441979-26442297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 244
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:27591590-27591911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr14:39779112-39778797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
262, 235
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:13006863-13006546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:14621827-14622134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:20600740-20600431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
218, 151
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:20712323-20712648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 301
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:21284985-21284666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 40
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:24417243-24416926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:34082800-34083108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
277, 40
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr14:46489897-46490215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
159, 91
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr14:12244029-12244341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
183, 21
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr14:39769864-39770191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr14:47584290-47584615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
169, 287
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr14:41809293-41809614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
129, 134
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr14:42154603-42154933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
207, 14
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:27356399-27356070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
204, 231
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:41211228-41210886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:47427401-47427078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
204, 278
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr14:22918717-22918389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr14:40269482-40269804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:6599594-6599920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:24683780-24684095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
193, 40
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:25682304-25681964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
182, 292
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:36437125-36437449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
90, 170
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:37103558-37103247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:48492426-48492754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 95
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr14:16237148-16237476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr14:45605448-45605121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
262, 80
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr14:24799126-24799459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 278
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr14:30798205-30798539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
204, 120
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr14:25943952-25943616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:34124817-34125153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 137
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr14:18811761-18811930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr14:44557478-44557678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr14:47609245-47609434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr14:35544158-35544366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr14:14326746-14326956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr14:19979671-19979881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr14:6203053-6203303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr14:20666667-20666912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr14:49748045-49747721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
203, 152
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr14:41091438-41091295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr14:18323335-18323537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr14:5076522-5076726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr14:35650845-35651103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
50, 101
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr14:24992169-24991905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
208, 136
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr14:5836260-5835950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr14:48517413-48517271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr14:36585604-36585801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr14:18911681-18911478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr14:26496218-26496015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
110, 84
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr14:39807106-39807307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr14:24980248-24980043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr14:38549157-38548958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr14:29300009-29300214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
199, 157
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr14:14419839-14419634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
200, 35
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr14:21018469-21018264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr14:21863675-21863879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr14:38031164-38030953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:41211840-41211618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
201, 77
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr14:27848556-27848316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
4-251
               

               
Cow position:
               
chr14:12546233-12546474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
4-251
               

               
Cow position:
               
chr14:25759811-25759563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
201, 228
               

               
Conread position:
               
4-251
               

               
Cow position:
               
chr14:33326039-33326283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
202, 95
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr14:40346822-40347059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr14:46965916-46965661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr14:16306191-16305930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 114
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr14:40230281-40230550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 152
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr14:39821522-39821248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
215, 85
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr14:106220-106492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
258, 23
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr14:48495792-48496079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr14:33538573-33538855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr14:21357919-21357620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr14:39926541-39926263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
200, 55
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr14:20009962-20010274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
213, 35
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr14:35420404-35420727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
5-123
               

               
Cow position:
               
chr14:20300267-20300385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr14:45300474-45300664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr14:37727095-37727302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr14:35820181-35820406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr14:37791195-37791422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
200, 76
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr14:29010598-29010368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr14:42785294-42785075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr14:1887303-1887540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr14:34021040-34020801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
131, 36
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr14:9029328-9029565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 90
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr14:40461927-40461691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
200, 45
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr14:49543958-49543721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr14:24581290-24581027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr14:46178910-46179166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
200, 76
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr14:17013863-17013589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 129
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr14:41479304-41479577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 153
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr14:7960114-7959860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
200, 24
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr14:35381943-35381654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
237, 156
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr14:37883562-37883852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr14:26620974-26620660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
6-205
               

               
Cow position:
               
chr14:11507888-11508088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
6-208
               

               
Cow position:
               
chr14:20069168-20069369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr14:2937998-2937727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr14:13385727-13385405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
200, 234
               

               
Conread position:
               
7-193
               

               
Cow position:
               
chr14:30760561-30760375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 128
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr14:35360555-35360349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
8-230
               

               
Cow position:
               
chr14:44214777-44214559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
8-251
               

               
Cow position:
               
chr14:19207216-19206970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr14:41756610-41756337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
197, 80
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr14:46735668-46735388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
10-128
               

               
Cow position:
               
chr14:41180366-41180484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-149
               

               
Cow position:
               
chr14:41132340-41132476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
10-163
               

               
Cow position:
               
chr14:28324987-28324835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
10-321
               

               
Cow position:
               
chr14:7291141-7290842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
143, 21
               

               
Conread position:
               
13-250
               

               
Cow position:
               
chr14:25695727-25695493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
191, 136
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr14:28304441-28304700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
15-326
               

               
Cow position:
               
chr14:17238707-17238390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
16-271
               

               
Cow position:
               
chr14:18904264-18904521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chr14:26432897-26433216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
247, 205
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr14:32574491-32574308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr14:18345393-18345686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
21-213
               

               
Cow position:
               
chr14:13367342-13367151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
23-271
               

               
Cow position:
               
chr14:39519032-39518784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
183, 64
               

               
Conread position:
               
24-208
               

               
Cow position:
               
chr14:19513048-19513221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
25-277
               

               
Cow position:
               
chr14:6735531-6735776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
194, 119
               

               
Conread position:
               
28-325
               

               
Cow position:
               
chr14:9308558-9308260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
30-236
               

               
Cow position:
               
chr14:45068756-45068963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
31-261
               

               
Cow position:
               
chr14:11641247-11641468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
31-266
               

               
Cow position:
               
chr14:37108582-37108811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 99
               

               
Conread position:
               
31-323
               

               
Cow position:
               
chr14:10702505-10702793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
31-327
               

               
Cow position:
               
chr14:18484912-18485217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
178, 264
               

               
Conread position:
               
32-220
               

               
Cow position:
               
chr14:12484221-12484405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
34-261
               

               
Cow position:
               
chr14:14466151-14466375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
34-282
               

               
Cow position:
               
chr14:24981783-24981532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
36-258
               

               
Cow position:
               
chr14:35607130-35607354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
36-320
               

               
Cow position:
               
chr14:24237142-24236869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
37-327
               

               
Cow position:
               
chr14:49086626-49086343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
173, 49
               

               
Conread position:
               
38-220
               

               
Cow position:
               
chr14:8848570-8848388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-236
               

               
Cow position:
               
chr14:20932938-20932741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
172, 13
               

               
Conread position:
               
40-268
               

               
Cow position:
               
chr14:27305477-27305248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 214
               

               
Conread position:
               
41-236
               

               
Cow position:
               
chr14:15795491-15795679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
42-276
               

               
Cow position:
               
chr14:49021584-49021819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
43-224
               

               
Cow position:
               
chr14:19106189-19106011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
44-251
               

               
Cow position:
               
chr14:40183360-40183151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
44-282
               

               
Cow position:
               
chr14:22967067-22966830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
165, 37
               

               
Conread position:
               
46-283
               

               
Cow position:
               
chr14:45677537-45677309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
49-276
               

               
Cow position:
               
chr14:38379331-38379106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
49-326
               

               
Cow position:
               
chr14:19593829-19594099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
166, 97
               

               
Conread position:
               
51-205
               

               
Cow position:
               
chr14:23682572-23682421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
51-228
               

               
Cow position:
               
chr14:16834639-16834470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
51-235
               

               
Cow position:
               
chr14:11748613-11748789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
51-261
               

               
Cow position:
               
chr14:12856903-12856703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
51-261
               

               
Cow position:
               
chr14:30662296-30662088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
163, 118
               

               
Conread position:
               
51-277
               

               
Cow position:
               
chr14:33247129-33247349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
151, 99
               

               
Conread position:
               
51-315
               

               
Cow position:
               
chr14:23712995-23712737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
52-236
               

               
Cow position:
               
chr14:33714380-33714556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
53-207
               

               
Cow position:
               
chr14:19986131-19985977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
53-277
               

               
Cow position:
               
chr14:35018449-35018668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
166, 103
               

               
Conread position:
               
53-327
               

               
Cow position:
               
chr14:5221980-5222254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
54-261
               

               
Cow position:
               
chr14:36709428-36709222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
163, 34
               

               
Conread position:
               
54-282
               

               
Cow position:
               
chr14:38143808-38144031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
207, 34
               

               
Conread position:
               
54-299
               

               
Cow position:
               
chr14:4109167-4109411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr14:26097382-26097655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 27
               

               
Conread position:
               
56-206
               

               
Cow position:
               
chr14:8488488-8488338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
56-251
               

               
Cow position:
               
chr14:44878482-44878675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr14:25385588-25385808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
206, 32
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr14:33209055-33209272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
205, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr14:41128194-41127972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
207, 26
               

               
Conread position:
               
56-299
               

               
Cow position:
               
chr14:14280721-14280475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
56-320
               

               
Cow position:
               
chr14:14187637-14187374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
56-320
               

               
Cow position:
               
chr14:25231345-25231606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
205, 100
               

               
Conread position:
               
56-320
               

               
Cow position:
               
chr14:27312728-27312467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
149, 78
               

               
Conread position:
               
56-320
               

               
Cow position:
               
chr14:38355487-38355227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
56-327
               

               
Cow position:
               
chr14:4649712-4649974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
57-209
               

               
Cow position:
               
chr14:42260254-42260406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-213
               

               
Cow position:
               
chr14:23527239-23527083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
57-236
               

               
Cow position:
               
chr14:34329356-34329527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
149, 91
               

               
Conread position:
               
57-245
               

               
Cow position:
               
chr14:20736833-20736646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
57-251
               

               
Cow position:
               
chr14:9285450-9285262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 73
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr14:34330842-34330652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
149, 91
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr14:5630466-5630239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr14:15913252-15913488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
58-302
               

               
Cow position:
               
chr14:4991293-4991064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
59-282
               

               
Cow position:
               
chr14:48412576-48412802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
151, 158
               

               
Conread position:
               
59-326
               

               
Cow position:
               
chr14:32452562-32452287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 229
               

               
Conread position:
               
60-207
               

               
Cow position:
               
chr14:26654778-26654922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
60-282
               

               
Cow position:
               
chr14:19624390-19624163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 107
               

               
Conread position:
               
60-282
               

               
Cow position:
               
chr14:33773753-33773971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 28
               

               
Conread position:
               
61-317
               

               
Cow position:
               
chr14:37131957-37131700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
194, 236
               

               
Conread position:
               
62-261
               

               
Cow position:
               
chr14:38295978-38296179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
145, 130
               

               
Conread position:
               
62-276
               

               
Cow position:
               
chr14:11819826-11820039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
201, 99
               

               
Conread position:
               
62-282
               

               
Cow position:
               
chr14:50589094-50589305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr14:12559188-12559333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
132, 126
               

               
Conread position:
               
64-274
               

               
Cow position:
               
chr14:19996614-19996402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
145, 103
               

               
Conread position:
               
65-277
               

               
Cow position:
               
chr14:10858726-10858516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
67-271
               

               
Cow position:
               
chr14:24922399-24922190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
69-300
               

               
Cow position:
               
chr14:4226904-4227145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
71-236
               

               
Cow position:
               
chr14:40034259-40034100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
72-325
               

               
Cow position:
               
chr14:23464527-23464777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
191, 53
               

               
Conread position:
               
74-274
               

               
Cow position:
               
chr14:11810284-11810485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
151, 58
               

               
Conread position:
               
74-282
               

               
Cow position:
               
chr14:47672597-47672809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr14:35498215-35498468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
130, 95
               

               
Conread position:
               
77-272
               

               
Cow position:
               
chr14:41190597-41190788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
78-320
               

               
Cow position:
               
chr14:39422304-39422549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
79-274
               

               
Cow position:
               
chr14:6233982-6234181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
82-270
               

               
Cow position:
               
chr14:17841009-17841199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
137, 61
               

               
Conread position:
               
82-320
               

               
Cow position:
               
chr14:19129789-19129550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 87
               

               
Conread position:
               
100-276
               

               
Cow position:
               
chr14:33309249-33309423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 69
               

               
Conread position:
               
101-310
               

               
Cow position:
               
chr14:50055660-50055444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 188
               

               
Conread position:
               
101-320
               

               
Cow position:
               
chr14:28114924-28115143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 173
               
Show alignments to all cow chromosomes.