Cow genome map
| Conread name: | Ss1.1-rece22c_a22.5 |
| Conread position: | 1-272 |
| Cow position: | chr10:9031393-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 89 |
| Conread position: | 1-342 |
| Cow position: | chr10:9010176-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-378 |
| Cow position: | chr10:8996280-8995912 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 98, 92 |
| Conread position: | 1-384 |
| Cow position: | chr10:8996532-8996149 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr10:8996868-8996485 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr10:9010344-9009961 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-337 |
| Cow position: | chr10:21939099-21938764 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-356 |
| Cow position: | chr10:9031310-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 91, 97 |
| Conread position: | 2-364 |
| Cow position: | chr10:8996363-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 98 |
| Conread position: | 2-375 |
| Cow position: | chr10:9010259-9009886 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 154 |
| Conread position: | 2-378 |
| Cow position: | chr10:8996615-8996239 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-378 |
| Cow position: | chr10:8996783-8996407 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-378 |
| Cow position: | chr10:9010511-9010135 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-384 |
| Cow position: | chr10:8996447-8996065 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 98 |
| Conread position: | 2-384 |
| Cow position: | chr10:8996699-8996317 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-384 |
| Cow position: | chr10:9010591-9010213 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 88, 94 |
| Conread position: | 15-384 |
| Cow position: | chr10:21939170-21938801 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 17-361 |
| Cow position: | chr10:9010412-9010068 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-378 |
| Cow position: | chr10:21939000-21938642 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 38-384 |
| Cow position: | chr10:9031262-9031608 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 84-384 |
| Cow position: | chr10:8996869-8996569 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-384 |
| Cow position: | chr10:9031237-9031524 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 137-384 |
| Cow position: | chr10:8996900-8996653 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-384 |
| Cow position: | chr10:9031228-9031440 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 13 |
Show alignments to all cow chromosomes.