Cow genome map
| Conread name: | Ss1.1-rece22c_a22.5 |
| Conread position: | 1-355 |
| Cow position: | chr13:39984549-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 98, 88 |
| Conread position: | 1-371 |
| Cow position: | chr13:39930709-39931079 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 1-378 |
| Cow position: | chr13:39984381-39984758 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 98 |
| Conread position: | 1-384 |
| Cow position: | chr13:39984045-39984428 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 161, 152 |
| Conread position: | 1-384 |
| Cow position: | chr13:39984129-39984512 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr13:39984297-39984680 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 98 |
| Conread position: | 1-384 |
| Cow position: | chr13:39984465-39984848 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 2-346 |
| Cow position: | chr13:56292136-56291791 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 77, 61 |
| Conread position: | 2-376 |
| Cow position: | chr13:56292293-56291930 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 61 |
| Conread position: | 2-384 |
| Cow position: | chr13:56333778-56334169 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 278, 0 |
| Conread position: | 17-384 |
| Cow position: | chr13:56333877-56334253 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 83, 74 |
| Conread position: | 23-376 |
| Cow position: | chr13:39984235-39984588 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 71, 77 |
| Conread position: | 26-365 |
| Cow position: | chr13:56333550-56333889 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 115, 128 |
| Conread position: | 26-384 |
| Cow position: | chr13:56292193-56291837 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 214, 42 |
| Conread position: | 32-366 |
| Cow position: | chr13:56333178-56333512 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 78-384 |
| Cow position: | chr13:56292301-56292006 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 15 |
| Conread position: | 98-315 |
| Cow position: | chr13:56317942-56318159 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 138, 121 |
| Conread position: | 108-376 |
| Cow position: | chr13:39983816-39984084 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 22 |
Show alignments to all cow chromosomes.