Cow genome map

Conread name: Ss1.1-rece22c_a22.5

Conread position: 1-351
Cow position:
Alignm length: 354
Alignm identity: 224
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 161, 148

Conread position: 1-369
Cow position:
Alignm length: 371
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 57, 69

Conread position: 1-369
Cow position:
Alignm length: 370
Alignm identity: 223
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 337, 325

Conread position: 1-374
Cow position:
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-375
Cow position:
Alignm length: 377
Alignm identity: 234
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 71

Conread position: 1-375
Cow position:
Alignm length: 377
Alignm identity: 230
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 155, 151

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 145

Conread position: 1-376
Cow position:
Alignm length: 377
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 94, 89

Conread position: 1-377
Cow position:
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-383
Cow position:
Alignm length: 384
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 315

Conread position: 1-383
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 0

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 160

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 313

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 67

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 169

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 66

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-233
Cow position:
Alignm length: 232
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-301
Cow position:
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 136, 145

Conread position: 2-314
Cow position:
Alignm length: 314
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 154, 150

Conread position: 2-314
Cow position:
Alignm length: 313
Alignm identity: 193
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-315
Cow position:
Alignm length: 314
Alignm identity: 196
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-343
Cow position:
Alignm length: 342
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-359
Cow position:
Alignm length: 359
Alignm identity: 237
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 154, 146

Conread position: 2-360
Cow position:
Alignm length: 360
Alignm identity: 216
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 179

Conread position: 2-360
Cow position:
Alignm length: 360
Alignm identity: 225
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 247, 253

Conread position: 2-363
Cow position:
Alignm length: 363
Alignm identity: 228
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 164, 169

Conread position: 2-368
Cow position:
Alignm length: 369
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 136, 142

Conread position: 2-369
Cow position:
Alignm length: 371
Alignm identity: 233
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 54

Conread position: 2-369
Cow position:
Alignm length: 368
Alignm identity: 232
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 2-370
Cow position:
Alignm length: 370
Alignm identity: 229
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 97, 42

Conread position: 2-375
Cow position:
Alignm length: 374
Alignm identity: 232
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-375
Cow position:
Alignm length: 375
Alignm identity: 237
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 95, 66

Conread position: 2-375
Cow position:
Alignm length: 374
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 2-375
Cow position:
Alignm length: 376
Alignm identity: 232
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 138, 42

Conread position: 2-375
Cow position:
Alignm length: 375
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 236, 231

Conread position: 2-375
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 64

Conread position: 2-375
Cow position:
Alignm length: 378
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 80, 69

Conread position: 2-375
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 65

Conread position: 2-375
Cow position:
Alignm length: 374
Alignm identity: 234
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-376
Cow position:
Alignm length: 376
Alignm identity: 240
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 85, 69

Conread position: 2-376
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-376
Cow position:
Alignm length: 376
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 334, 325

Conread position: 2-376
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 67

Conread position: 2-376
Cow position:
Alignm length: 380
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 82

Conread position: 2-376
Cow position:
Alignm length: 376
Alignm identity: 242
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 246, 253

Conread position: 2-377
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 57

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 232
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 255, 262

Conread position: 2-378
Cow position:
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position:
Alignm length: 377
Alignm identity: 229
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position:
Alignm length: 377
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 369

Conread position: 2-378
Cow position:
Alignm length: 379
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 154

Conread position: 2-379
Cow position:
Alignm length: 380
Alignm identity: 240
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 138, 154

Conread position: 2-379
Cow position:
Alignm length: 381
Alignm identity: 251
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 138, 154

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 236, 226

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 67

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 386
Alignm identity: 249
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 95, 88

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 247
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 240
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 231
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 170, 150

Conread position: 2-384
Cow position:
Alignm length: 386
Alignm identity: 248
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 82, 65

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 249
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 84, 77

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 244
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 387
Alignm identity: 248
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 64

Conread position: 2-384
Cow position:
Alignm length: 388
Alignm identity: 243
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 70

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 236
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 66

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 169, 150

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 234
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 3-369
Cow position:
Alignm length: 368
Alignm identity: 229
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 72

Conread position: 3-369
Cow position:
Alignm length: 368
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 233, 241

Conread position: 3-384
Cow position:
Alignm length: 383
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 323, 315

Conread position: 8-369
Cow position:
Alignm length: 364
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 80, 73

Conread position: 8-376
Cow position:
Alignm length: 370
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 58

Conread position: 8-376
Cow position:
Alignm length: 371
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 80, 60

Conread position: 8-384
Cow position:
Alignm length: 377
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-378
Cow position:
Alignm length: 370
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 146, 142

Conread position: 12-384
Cow position:
Alignm length: 375
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 62

Conread position: 12-384
Cow position:
Alignm length: 377
Alignm identity: 228
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 57

Conread position: 14-384
Cow position:
Alignm length: 373
Alignm identity: 226
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 76

Conread position: 15-376
Cow position:
Alignm length: 362
Alignm identity: 227
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 15-376
Cow position:
Alignm length: 365
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 81, 74

Conread position: 15-376
Cow position:
Alignm length: 364
Alignm identity: 232
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 81, 74

Conread position: 15-379
Cow position:
Alignm length: 366
Alignm identity: 231
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 63, 49

Conread position: 17-368
Cow position:
Alignm length: 353
Alignm identity: 212
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 319, 311

Conread position: 17-375
Cow position:
Alignm length: 360
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 83

Conread position: 17-376
Cow position:
Alignm length: 362
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 52

Conread position: 17-378
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 226

Conread position: 17-383
Cow position:
Alignm length: 368
Alignm identity: 228
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 75

Conread position: 17-384
Cow position:
Alignm length: 368
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 17-384
Cow position:
Alignm length: 368
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-384
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 56

Conread position: 19-377
Cow position:
Alignm length: 360
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 137, 133

Conread position: 20-357
Cow position:
Alignm length: 342
Alignm identity: 210
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 54

Conread position: 20-360
Cow position:
Alignm length: 342
Alignm identity: 209
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 61

Conread position: 23-352
Cow position:
Alignm length: 332
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 129

Conread position: 23-369
Cow position:
Alignm length: 349
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 129

Conread position: 23-384
Cow position:
Alignm length: 362
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 23-384
Cow position:
Alignm length: 363
Alignm identity: 238
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 65, 58

Conread position: 23-384
Cow position:
Alignm length: 363
Alignm identity: 236
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 65, 58

Conread position: 32-384
Cow position:
Alignm length: 354
Alignm identity: 216
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 217, 204

Conread position: 38-384
Cow position:
Alignm length: 350
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 133, 127

Conread position: 72-360
Cow position:
Alignm length: 294
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 23

Conread position: 77-384
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 77-384
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 172, 163

Conread position: 82-375
Cow position:
Alignm length: 294
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 86-369
Cow position:
Alignm length: 284
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 96-375
Cow position:
Alignm length: 281
Alignm identity: 175
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 56

Conread position: 96-376
Cow position:
Alignm length: 283
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 56

Conread position: 97-376
Cow position:
Alignm length: 283
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 73

Conread position: 102-371
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 107-384
Cow position:
Alignm length: 280
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 202, 195

Conread position: 140-384
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 174

Conread position: 169-384
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 170-371
Cow position:
Alignm length: 202
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 170-376
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 168, 156

Show alignments to all cow chromosomes.