Cow genome map


           Conread name:
           Ss1.1-rece22c_a22.5
        

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               92, 98
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               61, 71
               

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 157
               

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 315
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               82, 64
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               138, 146
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 316
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 151
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 99
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 92
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 99
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               85, 62
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 99
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               137, 153
               

               Conread position:
               2-229
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               91, 97
               

               Conread position:
               2-289
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 98
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               330, 336
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               92, 98
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               2-376
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 98
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               322, 315
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 230
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 90
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 147
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               92, 98
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               251
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               60, 70
               

               Conread position:
               2-384
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 90
               

               Conread position:
               3-384
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               96, 90
               

               Conread position:
               6-384
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 0
               

               Conread position:
               16-376
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               223, 216
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-384
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               18-384
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 82
               

               Conread position:
               21-375
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               73-384
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-384
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-384
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               5, 0
               
Show alignments to all cow chromosomes.