Cow genome map

Conread name: Ss1.1-rece22c_a22.5

Conread position: 1-312
Cow position: chr19:20678352-20678663 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 92

Conread position: 1-345
Cow position: chr19:14940725-14941069 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-346
Cow position: chr19:23614757-23615102 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 89

Conread position: 1-357
Cow position: chr19:14959177-14958827 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 96, 63

Conread position: 1-368
Cow position: chr19:23597346-23597713 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 333

Conread position: 1-369
Cow position: chr19:23614085-23614453 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 88

Conread position: 1-373
Cow position: chr19:43570159-43569787 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 152

Conread position: 1-375
Cow position: chr19:20677680-20678054 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 88

Conread position: 1-376
Cow position: chr19:23614421-23614796 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-378
Cow position: chr19:20635400-20635023 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 93

Conread position: 1-378
Cow position: chr19:23597262-23597639 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-378
Cow position: chr19:23613413-23613790 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 55

Conread position: 1-378
Cow position: chr19:23613497-23613874 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 349

Conread position: 1-378
Cow position: chr19:23614337-23614714 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 315

Conread position: 1-378
Cow position: chr19:23649451-23649828 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 143

Conread position: 1-378
Cow position: chr19:23649871-23650248 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 98

Conread position: 1-379
Cow position: chr19:43570075-43569699 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 0

Conread position: 1-382
Cow position: chr19:14960242-14959864 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 94

Conread position: 1-384
Cow position: chr19:14916028-14916406 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 250
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 62

Conread position: 1-384
Cow position: chr19:14940305-14940688 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 326

Conread position: 1-384
Cow position: chr19:14940473-14940856 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 71

Conread position: 1-384
Cow position: chr19:14940641-14941024 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 333

Conread position: 1-384
Cow position: chr19:14960326-14959945 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 145

Conread position: 1-384
Cow position: chr19:14960410-14960029 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 149

Conread position: 1-384
Cow position: chr19:20677764-20678147 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position: chr19:20677848-20678231 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 65

Conread position: 1-384
Cow position: chr19:20678100-20678483 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 67

Conread position: 1-384
Cow position: chr19:23596929-23597309 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 99

Conread position: 1-384
Cow position: chr19:23613749-23614132 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position: chr19:23613833-23614216 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position: chr19:23614169-23614552 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 1-384
Cow position: chr19:23614253-23614636 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position: chr19:23614505-23614888 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-298
Cow position: chr19:14959587-14959292 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 84, 80

Conread position: 2-319
Cow position: chr19:14948317-14948000 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 46

Conread position: 2-357
Cow position: chr19:14960075-14959722 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 97, 90

Conread position: 2-364
Cow position: chr19:23650124-23650486 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 62

Conread position: 2-371
Cow position: chr19:23650040-23650409 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-375
Cow position: chr19:14940390-14940763 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 145

Conread position: 2-375
Cow position: chr19:23649704-23650077 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-376
Cow position: chr19:23597095-23597469 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-377
Cow position: chr19:23649620-23649995 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position: chr19:14940054-14940430 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position: chr19:14940138-14940514 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position: chr19:23649788-23650164 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 241
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position: chr19:23649956-23650332 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 41

Conread position: 2-384
Cow position: chr19:14940222-14940604 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position: chr19:14948484-14948103 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 243
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 80, 0

Conread position: 2-384
Cow position: chr19:14959419-14959052 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 80, 71

Conread position: 2-384
Cow position: chr19:20635483-20635101 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 64

Conread position: 2-384
Cow position: chr19:23613582-23613964 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 318

Conread position: 2-384
Cow position: chr19:23613666-23614048 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 314

Conread position: 2-384
Cow position: chr19:23613918-23614300 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 67

Conread position: 2-384
Cow position: chr19:23614590-23614972 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position: chr19:23614674-23615056 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 315

Conread position: 2-384
Cow position: chr19:23649536-23649918 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 154, 150

Conread position: 2-384
Cow position: chr19:43570242-43569860 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-377
Cow position: chr19:43570398-43570035 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 5

Conread position: 5-378
Cow position: chr19:23596849-23597219 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 236
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 48, 58

Conread position: 5-384
Cow position: chr19:14939973-14940352 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-376
Cow position: chr19:14960154-14959787 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 279

Conread position: 7-384
Cow position: chr19:20678190-20678567 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 82

Conread position: 7-384
Cow position: chr19:23649289-23649666 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 71

Conread position: 8-377
Cow position: chr19:23614008-23614377 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-384
Cow position: chr19:20635561-20635185 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 92

Conread position: 8-384
Cow position: chr19:20677435-20677811 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 68

Conread position: 8-384
Cow position: chr19:20678275-20678651 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 91

Conread position: 9-316
Cow position: chr19:20635308-20635001 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 85, 91

Conread position: 15-268
Cow position: chr19:23614855-23615108 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 15-378
Cow position: chr19:14915957-14916317 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 9

Conread position: 15-384
Cow position: chr19:20677946-20678315 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 55

Conread position: 16-375
Cow position: chr19:20635721-20635362 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 6

Conread position: 16-384
Cow position: chr19:20677359-20677727 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 224
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 77

Conread position: 17-370
Cow position: chr19:20678452-20678802 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 256, 0

Conread position: 17-376
Cow position: chr19:20677528-20677887 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 53

Conread position: 17-378
Cow position: chr19:23597194-23597555 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 83

Conread position: 17-384
Cow position: chr19:20678032-20678399 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 51

Conread position: 23-384
Cow position: chr19:14959239-14958884 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 80

Conread position: 23-384
Cow position: chr19:23613351-23613712 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 76

Conread position: 38-384
Cow position: chr19:20677633-20677979 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 51

Conread position: 45-384
Cow position: chr19:14959710-14959373 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 102, 59

Conread position: 75-378
Cow position: chr19:14960420-14960119 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 0

Conread position: 77-384
Cow position: chr19:23649443-23649750 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 86-384
Cow position: chr19:23597095-23597393 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 54, 83

Conread position: 98-365
Cow position: chr19:14959575-14959308 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 236, 219

Conread position: 98-384
Cow position: chr19:14915956-14916241 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 12

Conread position: 104-383
Cow position: chr19:14960475-14960196 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 108-383
Cow position: chr19:43570459-43570197 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 11

Conread position: 191-384
Cow position: chr19:14960472-14960279 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.