Cow genome map
| Conread name: | Ss1.1-rece22c_a22.5 |
| Conread position: | 1-272 |
| Cow position: | chr2:82800177-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 1-365 |
| Cow position: | chr2:78755983-78756346 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 131 |
| Conread position: | 1-374 |
| Cow position: | chr2:78755315-78755684 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 327, 22 |
| Conread position: | 1-376 |
| Cow position: | chr2:82799589-82799964 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-378 |
| Cow position: | chr2:78754409-78754780 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 1-383 |
| Cow position: | chr2:78755565-78755945 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 1-384 |
| Cow position: | chr2:78754811-78755194 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 1-384 |
| Cow position: | chr2:78754895-78755278 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 1-384 |
| Cow position: | chr2:78754979-78755361 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 1-384 |
| Cow position: | chr2:78755398-78755778 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 63, 77 |
| Conread position: | 2-356 |
| Cow position: | chr2:82800094-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-378 |
| Cow position: | chr2:82799842-82800218 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 2-384 |
| Cow position: | chr2:82799506-82799888 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 2-384 |
| Cow position: | chr2:82799674-82800056 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-384 |
| Cow position: | chr2:82800010-82800392 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 324 |
| Conread position: | 3-306 |
| Cow position: | chr2:78756070-78756370 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 3-373 |
| Cow position: | chr2:78754243-78754611 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 4-378 |
| Cow position: | chr2:78755734-78756109 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 90, 96 |
| Conread position: | 7-384 |
| Cow position: | chr2:78755905-78756283 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 135, 209 |
| Conread position: | 7-384 |
| Cow position: | chr2:86465167-86465544 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 7-384 |
| Cow position: | chr2:86465335-86465712 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 7-384 |
| Cow position: | chr2:86465671-86466048 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 15-375 |
| Cow position: | chr2:86465763-86466123 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 189, 171 |
| Conread position: | 15-376 |
| Cow position: | chr2:86465511-86465872 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 64, 53 |
| Conread position: | 17-382 |
| Cow position: | chr2:78755663-78756028 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 126, 142 |
| Conread position: | 17-384 |
| Cow position: | chr2:82799941-82800308 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 19-378 |
| Cow position: | chr2:82799775-82800134 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 119, 125 |
| Conread position: | 33-384 |
| Cow position: | chr2:82799453-82799804 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-315 |
| Cow position: | chr2:86465951-86466147 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.