Cow genome map

Conread name: Ss1.1-rece22c_a22.5

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 74

Conread position: 1-280
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-312
Cow position:
Alignm length: 316
Alignm identity: 211
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 92, 98

Conread position: 1-344
Cow position:
Alignm length: 347
Alignm identity: 230
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 80, 73

Conread position: 1-368
Cow position:
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 151

Conread position: 1-368
Cow position:
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-375
Cow position:
Alignm length: 375
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 99

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 234
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 94, 88

Conread position: 1-376
Cow position:
Alignm length: 376
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-376
Cow position:
Alignm length: 380
Alignm identity: 252
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 23, 14

Conread position: 1-376
Cow position:
Alignm length: 376
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-376
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 215

Conread position: 1-376
Cow position:
Alignm length: 376
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-376
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 319

Conread position: 1-376
Cow position:
Alignm length: 379
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 248, 231

Conread position: 1-377
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 66

Conread position: 1-378
Cow position:
Alignm length: 380
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 147

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 150

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 150

Conread position: 1-379
Cow position:
Alignm length: 383
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 73

Conread position: 1-382
Cow position:
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 99

Conread position: 1-384
Cow position:
Alignm length: 388
Alignm identity: 251
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 113, 151

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 387
Alignm identity: 241
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 62

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 63

Conread position: 1-384
Cow position:
Alignm length: 388
Alignm identity: 245
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 94, 88

Conread position: 2-263
Cow position:
Alignm length: 262
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-278
Cow position:
Alignm length: 279
Alignm identity: 181
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 154, 168

Conread position: 2-355
Cow position:
Alignm length: 354
Alignm identity: 217
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-361
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 85

Conread position: 2-363
Cow position:
Alignm length: 365
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 72

Conread position: 2-364
Cow position:
Alignm length: 365
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 66

Conread position: 2-364
Cow position:
Alignm length: 364
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 76

Conread position: 2-367
Cow position:
Alignm length: 369
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 242

Conread position: 2-375
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 323, 313

Conread position: 2-376
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-376
Cow position:
Alignm length: 377
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 145

Conread position: 2-377
Cow position:
Alignm length: 380
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 78

Conread position: 2-377
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 76

Conread position: 2-377
Cow position:
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 76

Conread position: 2-378
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position:
Alignm length: 381
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 69

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 242
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 73

Conread position: 2-378
Cow position:
Alignm length: 379
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 79

Conread position: 2-378
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 245, 233

Conread position: 2-378
Cow position:
Alignm length: 380
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 90

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 151

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 66

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 151

Conread position: 2-378
Cow position:
Alignm length: 380
Alignm identity: 243
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 85, 72

Conread position: 2-379
Cow position:
Alignm length: 380
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 73

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 17

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 85

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 159, 148

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 76

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 152

Conread position: 2-384
Cow position:
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 98

Conread position: 2-384
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 79, 65

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 253
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 333, 314

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 247
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 54, 63

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 387
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 66

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 336, 325

Conread position: 2-384
Cow position:
Alignm length: 386
Alignm identity: 251
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 71

Conread position: 2-384
Cow position:
Alignm length: 386
Alignm identity: 238
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 168, 156

Conread position: 3-366
Cow position:
Alignm length: 366
Alignm identity: 225
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 350, 0

Conread position: 3-384
Cow position:
Alignm length: 382
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-384
Cow position:
Alignm length: 385
Alignm identity: 256
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 75, 6

Conread position: 6-378
Cow position:
Alignm length: 373
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-384
Cow position:
Alignm length: 382
Alignm identity: 229
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 147, 153

Conread position: 7-384
Cow position:
Alignm length: 380
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 76, 69

Conread position: 8-384
Cow position:
Alignm length: 378
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 239, 224

Conread position: 8-384
Cow position:
Alignm length: 377
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 12-376
Cow position:
Alignm length: 367
Alignm identity: 220
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 139, 151

Conread position: 12-380
Cow position:
Alignm length: 372
Alignm identity: 234
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 69, 59

Conread position: 12-384
Cow position:
Alignm length: 375
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 222, 231

Conread position: 15-384
Cow position:
Alignm length: 373
Alignm identity: 246
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 61

Conread position: 15-384
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 58

Conread position: 17-314
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 232, 220

Conread position: 17-316
Cow position:
Alignm length: 303
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 52

Conread position: 17-384
Cow position:
Alignm length: 371
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 52

Conread position: 17-384
Cow position:
Alignm length: 373
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 56

Conread position: 17-384
Cow position:
Alignm length: 372
Alignm identity: 232
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 60

Conread position: 19-384
Cow position:
Alignm length: 367
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 146, 136

Conread position: 21-376
Cow position:
Alignm length: 359
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 134

Conread position: 23-384
Cow position:
Alignm length: 367
Alignm identity: 239
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 64, 44

Conread position: 25-384
Cow position:
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-384
Cow position:
Alignm length: 360
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 33-384
Cow position:
Alignm length: 353
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 45, 22

Conread position: 33-384
Cow position:
Alignm length: 353
Alignm identity: 233
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 22

Conread position: 38-384
Cow position:
Alignm length: 350
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 112

Conread position: 38-384
Cow position:
Alignm length: 349
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 126, 112

Conread position: 74-378
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 66, 73

Conread position: 84-378
Cow position:
Alignm length: 296
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 63

Conread position: 93-384
Cow position:
Alignm length: 292
Alignm identity: 193
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 108-384
Cow position:
Alignm length: 280
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 206, 215

Conread position: 108-384
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 232, 225

Conread position: 115-384
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 133, 125

Conread position: 115-384
Cow position:
Alignm length: 271
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 218, 201

Conread position: 120-384
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 128-384
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 43

Conread position: 139-384
Cow position:
Alignm length: 246
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 160-357
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 169-384
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 19

Show alignments to all cow chromosomes.