Cow genome map
| Conread name: | Ss1.1-rece22c_a22.5 |
| Conread position: | 1-292 |
| Cow position: | chr24:17035224-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 149, 156 |
| Conread position: | 1-356 |
| Cow position: | chr24:17077863-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 150 |
| Conread position: | 1-375 |
| Cow position: | chr24:17035980-17035606 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-376 |
| Cow position: | chr24:17035476-17035101 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-378 |
| Cow position: | chr24:17070521-17070898 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 89 |
| Conread position: | 1-378 |
| Cow position: | chr24:17078283-17077906 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17035560-17035177 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17035728-17035345 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17036064-17035681 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17036148-17035765 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17036232-17035849 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17036316-17035933 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17036400-17036017 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17070437-17070820 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 150 |
| Conread position: | 1-384 |
| Cow position: | chr24:17070605-17070988 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chr24:17078031-17077648 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 326 |
| Conread position: | 2-301 |
| Cow position: | chr24:17013227-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 83, 66 |
| Conread position: | 2-367 |
| Cow position: | chr24:17035391-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 323 |
| Conread position: | 2-371 |
| Cow position: | chr24:17070690-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 146 |
| Conread position: | 2-375 |
| Cow position: | chr24:17036483-17036110 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-376 |
| Cow position: | chr24:17035307-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 135, 145 |
| Conread position: | 2-376 |
| Cow position: | chr24:17035811-17035437 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 2-377 |
| Cow position: | chr24:17077946-17077571 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-378 |
| Cow position: | chr24:17035643-17035267 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 332 |
| Conread position: | 2-378 |
| Cow position: | chr24:17078114-17077738 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-384 |
| Cow position: | chr24:17035895-17035513 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 17-377 |
| Cow position: | chr24:17036551-17036192 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 6 |
| Conread position: | 23-376 |
| Cow position: | chr24:17013166-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 133, 18 |
| Conread position: | 47-378 |
| Cow position: | chr24:17078153-17077822 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 108-375 |
| Cow position: | chr24:17013165-17013432 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 231, 226 |
| Conread position: | 110-332 |
| Cow position: | chr24:16986433-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 117-384 |
| Cow position: | chr24:17036617-17036353 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 119-376 |
| Cow position: | chr24:17070387-17070644 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 173-384 |
| Cow position: | chr24:16986412-16986623 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.