Cow genome map

Conread name: Ss1.1-rece22c_a22.5

Conread position: 1-343
Cow position:
Alignm length: 347
Alignm identity: 222
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 81

Conread position: 1-351
Cow position:
Alignm length: 354
Alignm identity: 226
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 78, 62

Conread position: 1-351
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 56, 71

Conread position: 1-352
Cow position:
Alignm length: 353
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 341, 346

Conread position: 1-369
Cow position:
Alignm length: 370
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 149

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 233
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 337, 326

Conread position: 1-376
Cow position:
Alignm length: 379
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 55

Conread position: 1-376
Cow position:
Alignm length: 379
Alignm identity: 251
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 61, 75

Conread position: 1-378
Cow position:
Alignm length: 381
Alignm identity: 239
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 213, 154

Conread position: 1-378
Cow position:
Alignm length: 380
Alignm identity: 246
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 73, 66

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 99

Conread position: 1-378
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 225
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 318, 323

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 247
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 79, 86

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 232
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 65

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 65

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 252
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 108, 88

Conread position: 1-384
Cow position:
Alignm length: 387
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 56

Conread position: 1-384
Cow position:
Alignm length: 387
Alignm identity: 256
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 98, 22

Conread position: 1-384
Cow position:
Alignm length: 387
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 242

Conread position: 1-384
Cow position:
Alignm length: 389
Alignm identity: 237
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 67

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 237
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 65

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 97

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 98, 92

Conread position: 2-277
Cow position:
Alignm length: 276
Alignm identity: 187
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 2-351
Cow position:
Alignm length: 350
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 2-354
Cow position:
Alignm length: 353
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-354
Cow position:
Alignm length: 353
Alignm identity: 218
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 2-356
Cow position:
Alignm length: 357
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 87

Conread position: 2-375
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 149

Conread position: 2-377
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 147

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 169

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 147

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 76

Conread position: 2-378
Cow position:
Alignm length: 378
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 145

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 150

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 147

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 247
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 62

Conread position: 2-384
Cow position:
Alignm length: 385
Alignm identity: 252
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 66

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 246
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 378, 17

Conread position: 2-384
Cow position:
Alignm length: 388
Alignm identity: 238
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 70

Conread position: 2-384
Cow position:
Alignm length: 391
Alignm identity: 240
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 81

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-227
Cow position:
Alignm length: 223
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 65

Conread position: 17-277
Cow position:
Alignm length: 262
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 135

Conread position: 17-384
Cow position:
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-384
Cow position:
Alignm length: 368
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 17-384
Cow position:
Alignm length: 370
Alignm identity: 239
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 60, 41

Conread position: 20-378
Cow position:
Alignm length: 363
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 69

Conread position: 23-369
Cow position:
Alignm length: 349
Alignm identity: 210
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 172, 158

Conread position: 26-365
Cow position:
Alignm length: 344
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 43

Conread position: 26-376
Cow position:
Alignm length: 352
Alignm identity: 228
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 52, 33

Conread position: 29-377
Cow position:
Alignm length: 352
Alignm identity: 239
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 120, 16

Conread position: 74-352
Cow position:
Alignm length: 281
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 82

Conread position: 77-376
Cow position:
Alignm length: 304
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 253

Conread position: 77-377
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 239

Conread position: 77-384
Cow position:
Alignm length: 308
Alignm identity: 204
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 85-384
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 96-377
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-384
Cow position:
Alignm length: 290
Alignm identity: 192
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 51

Conread position: 98-384
Cow position:
Alignm length: 287
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 100-378
Cow position:
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 105-384
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 106-317
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 207, 0

Conread position: 107-384
Cow position:
Alignm length: 279
Alignm identity: 179
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 225, 231

Conread position: 108-376
Cow position:
Alignm length: 270
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 147, 135

Conread position: 109-377
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 127, 135

Conread position: 109-378
Cow position:
Alignm length: 270
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 114-378
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 123-381
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 255, 0

Conread position: 128-384
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 169-384
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 14

Show alignments to all cow chromosomes.