Cow genome map
| Conread name: | Ss1.1-rece22c_a22.5 |
| Conread position: | 1-315 |
| Cow position: | chr6:49341138-49341451 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 98 |
| Conread position: | 1-345 |
| Cow position: | chr6:49429130-49429474 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 155, 147 |
| Conread position: | 1-370 |
| Cow position: | chr6:49396607-49396976 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 1-384 |
| Cow position: | chr6:49340466-49340849 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 1-384 |
| Cow position: | chr6:49340718-49341101 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 151 |
| Conread position: | 1-384 |
| Cow position: | chr6:49340970-49341353 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 99 |
| Conread position: | 2-308 |
| Cow position: | chr6:49396692-49396998 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 2-375 |
| Cow position: | chr6:49340803-49341176 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 98 |
| Conread position: | 2-376 |
| Cow position: | chr6:49396026-49396394 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 2-376 |
| Cow position: | chr6:49396272-49396646 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-376 |
| Cow position: | chr6:49396440-49396814 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-376 |
| Cow position: | chr6:49396524-49396898 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 167, 150 |
| Conread position: | 2-378 |
| Cow position: | chr6:49340635-49341011 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 97 |
| Conread position: | 2-378 |
| Cow position: | chr6:49341055-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 97 |
| Conread position: | 2-384 |
| Cow position: | chr6:49340551-49340933 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 98 |
| Conread position: | 2-384 |
| Cow position: | chr6:49340887-49341269 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 97 |
| Conread position: | 2-384 |
| Cow position: | chr6:49396356-49396738 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 70 |
| Conread position: | 2-384 |
| Cow position: | chr6:49428963-49429345 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 66 |
| Conread position: | 7-384 |
| Cow position: | chr6:49340388-49340765 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 93 |
| Conread position: | 47-379 |
| Cow position: | chr6:49396233-49396565 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 155-384 |
| Cow position: | chr6:49340368-49340597 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.