Cow genome map

Conread name: Ss1.1-rece22c_a22.5

Conread position: 1-229
Cow position: chr7:1440036-1440264 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-306
Cow position: chr7:1438395-1438700 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 191
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 68

Conread position: 1-312
Cow position: chr7:1439953-1440263 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 18

Conread position: 1-315
Cow position: chr7:8243029-8243343 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 254, 234

Conread position: 1-361
Cow position: chr7:8325803-8326167 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 98

Conread position: 1-365
Cow position: chr7:3180431-3180795 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-370
Cow position: chr7:42878710-42878341 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 92

Conread position: 1-373
Cow position: chr7:18390392-18390764 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 61, 96

Conread position: 1-373
Cow position: chr7:42878626-42878251 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 0

Conread position: 1-376
Cow position: chr7:42878794-42878419 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-376
Cow position: chr7:42879130-42878755 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-377
Cow position: chr7:1014917-1015293 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-377
Cow position: chr7:1015085-1015460 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 90

Conread position: 1-377
Cow position: chr7:1438311-1438687 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 227
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 137, 148

Conread position: 1-377
Cow position: chr7:42879046-42878670 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 316

Conread position: 1-378
Cow position: chr7:1014335-1014706 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 242
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 93, 99

Conread position: 1-378
Cow position: chr7:1014587-1014958 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 239
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 171, 64

Conread position: 1-378
Cow position: chr7:1439448-1439827 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 237
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 246, 139

Conread position: 1-378
Cow position: chr7:3180179-3180556 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 348

Conread position: 1-378
Cow position: chr7:3180263-3180640 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 263

Conread position: 1-378
Cow position: chr7:8325635-8326012 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 68

Conread position: 1-382
Cow position: chr7:8243281-8243661 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 337, 66

Conread position: 1-382
Cow position: chr7:8243700-8244079 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 330, 296

Conread position: 1-384
Cow position: chr7:1014833-1015216 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position: chr7:1439786-1440167 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 245
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 1-384
Cow position: chr7:1439869-1440251 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 102, 0

Conread position: 1-384
Cow position: chr7:3179759-3180142 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 147

Conread position: 1-384
Cow position: chr7:3179927-3180310 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position: chr7:3180347-3180730 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 61

Conread position: 1-384
Cow position: chr7:8242861-8243244 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 239
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 86, 68

Conread position: 1-384
Cow position: chr7:8243448-8243831 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 85, 71

Conread position: 1-384
Cow position: chr7:8277406-8277789 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 245
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 244, 236

Conread position: 1-384
Cow position: chr7:8277658-8278041 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 255
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 68

Conread position: 1-384
Cow position: chr7:8277910-8278293 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 76

Conread position: 1-384
Cow position: chr7:8324879-8325262 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 68

Conread position: 1-384
Cow position: chr7:8325131-8325514 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 68

Conread position: 1-384
Cow position: chr7:8325299-8325682 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 77

Conread position: 1-384
Cow position: chr7:8325551-8325934 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 69

Conread position: 1-384
Cow position: chr7:11601209-11600826 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 88

Conread position: 1-384
Cow position: chr7:18390140-18390523 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 76

Conread position: 1-384
Cow position: chr7:42878878-42878495 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 62

Conread position: 1-384
Cow position: chr7:42878962-42878579 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 71

Conread position: 1-384
Cow position: chr7:42879214-42878831 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 99

Conread position: 2-270
Cow position: chr7:11434508-11434240 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 175
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 70

Conread position: 2-275
Cow position: chr7:11600704-11600430 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 268, 0

Conread position: 2-378
Cow position: chr7:1014750-1015126 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 75

Conread position: 2-378
Cow position: chr7:1015002-1015378 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-378
Cow position: chr7:3179844-3180220 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 65

Conread position: 2-384
Cow position: chr7:3180012-3180394 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 154

Conread position: 2-384
Cow position: chr7:3180096-3180478 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 90

Conread position: 2-384
Cow position: chr7:8242946-8243328 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 138, 145

Conread position: 2-384
Cow position: chr7:8243617-8243999 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 237
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position: chr7:8325048-8325430 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 251
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 91, 97

Conread position: 2-384
Cow position: chr7:11601040-11600658 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 68

Conread position: 2-384
Cow position: chr7:18389973-18390355 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 92, 100

Conread position: 2-384
Cow position: chr7:18390225-18390607 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 97

Conread position: 2-384
Cow position: chr7:18390309-18390691 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 62

Conread position: 3-377
Cow position: chr7:42879296-42878922 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-378
Cow position: chr7:1014668-1015042 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 153, 148

Conread position: 6-384
Cow position: chr7:11600868-11600490 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 72

Conread position: 7-378
Cow position: chr7:8325473-8325844 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 70

Conread position: 8-376
Cow position: chr7:8278001-8278369 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 67

Conread position: 8-378
Cow position: chr7:11601118-11600748 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-359
Cow position: chr7:11600778-11600430 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 88

Conread position: 15-384
Cow position: chr7:1014517-1014880 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 135, 0

Conread position: 17-374
Cow position: chr7:8278094-8278451 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 47, 81

Conread position: 17-384
Cow position: chr7:8243548-8243915 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 60

Conread position: 17-384
Cow position: chr7:8277842-8278209 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 69, 53

Conread position: 17-384
Cow position: chr7:8325735-8326102 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 64

Conread position: 17-384
Cow position: chr7:11434822-11434462 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 237
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 77, 83

Conread position: 18-384
Cow position: chr7:8243130-8243495 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 231
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 314, 250

Conread position: 19-384
Cow position: chr7:8243382-8243747 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 66

Conread position: 19-384
Cow position: chr7:8277256-8277621 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 222
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 59

Conread position: 19-384
Cow position: chr7:11434652-11434294 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 51

Conread position: 23-378
Cow position: chr7:1014273-1014628 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 298, 291

Conread position: 23-384
Cow position: chr7:8324817-8325178 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 46, 54

Conread position: 26-384
Cow position: chr7:8277599-8277957 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 312, 296

Conread position: 38-384
Cow position: chr7:8277527-8277873 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 59, 31

Conread position: 45-376
Cow position: chr7:18390100-18390431 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 47

Conread position: 72-384
Cow position: chr7:1014236-1014550 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 8, 0

Conread position: 77-384
Cow position: chr7:3179751-3180058 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 164, 158

Conread position: 93-376
Cow position: chr7:42879374-42879091 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 27

Conread position: 98-318
Cow position: chr7:11434496-11434276 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 107-384
Cow position: chr7:42879276-42878999 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 109-384
Cow position: chr7:8324735-8325010 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 47

Conread position: 112-384
Cow position: chr7:8242804-8243076 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 176
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 57, 43

Conread position: 116-384
Cow position: chr7:3179706-3179974 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 36

Conread position: 169-384
Cow position: chr7:1439448-1439661 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 0

Show alignments to all cow chromosomes.