Cow genome map

Conread name: Ss1.1-rece22c_a22.5

Conread position: 1-272
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 155, 146

Conread position: 1-301
Cow position:
Alignm length: 302
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 235, 244

Conread position: 1-370
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-375
Cow position:
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-375
Cow position:
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 182

Conread position: 1-376
Cow position:
Alignm length: 377
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 99

Conread position: 1-376
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 90

Conread position: 1-376
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-376
Cow position:
Alignm length: 376
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-376
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 65

Conread position: 1-377
Cow position:
Alignm length: 378
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 314

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 98

Conread position: 1-378
Cow position:
Alignm length: 381
Alignm identity: 245
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 92, 98

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 92

Conread position: 1-378
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 151

Conread position: 1-378
Cow position:
Alignm length: 378
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-378
Cow position:
Alignm length: 380
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 234
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 234, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 98

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 151

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 153

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 248
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 295, 320

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 150

Conread position: 1-384
Cow position:
Alignm length: 384
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 150

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 151

Conread position: 2-361
Cow position:
Alignm length: 360
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 2-370
Cow position:
Alignm length: 370
Alignm identity: 238
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 134, 156

Conread position: 2-373
Cow position:
Alignm length: 373
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 336, 314

Conread position: 2-375
Cow position:
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-376
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 98

Conread position: 2-384
Cow position:
Alignm length: 389
Alignm identity: 250
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 45, 41

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 247
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 348

Conread position: 2-384
Cow position:
Alignm length: 383
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-384
Cow position:
Alignm length: 383
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 95

Conread position: 5-368
Cow position:
Alignm length: 369
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 61

Conread position: 6-378
Cow position:
Alignm length: 374
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 150, 146

Conread position: 12-384
Cow position:
Alignm length: 376
Alignm identity: 229
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 178, 51

Conread position: 15-384
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-377
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 18

Conread position: 45-377
Cow position:
Alignm length: 334
Alignm identity: 222
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 269, 284

Conread position: 107-384
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 110-378
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 73, 63

Conread position: 127-383
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 128-384
Cow position:
Alignm length: 258
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 149, 141

Conread position: 167-378
Cow position:
Alignm length: 214
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 82

Conread position: 211-384
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.