Cow genome map
| Conread name: | Ss1.1-rece22c_a22.5 |
| Conread position: | 1-281 |
| Cow position: | chrX:25324517-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-310 |
| Cow position: | chrX:29045681-29045372 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 93, 99 |
| Conread position: | 1-370 |
| Cow position: | chrX:25325357-25324988 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-375 |
| Cow position: | chrX:25325021-25324647 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 177 |
| Conread position: | 1-375 |
| Cow position: | chrX:25325525-25325151 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 149 |
| Conread position: | 1-376 |
| Cow position: | chrX:25309784-25310159 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 146 |
| Conread position: | 1-376 |
| Cow position: | chrX:25324937-25324562 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-377 |
| Cow position: | chrX:25324853-25324477 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-377 |
| Cow position: | chrX:29045030-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chrX:25310204-25310586 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 1-384 |
| Cow position: | chrX:25324685-25324302 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 1-384 |
| Cow position: | chrX:25324769-25324386 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chrX:25325189-25324806 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | chrX:25325441-25325058 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 1-384 |
| Cow position: | chrX:25325609-25325226 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 151 |
| Conread position: | 1-384 |
| Cow position: | chrX:29045282-29044899 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-360 |
| Cow position: | chrX:14181495-14181137 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 2-365 |
| Cow position: | chrX:25324600-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 176 |
| Conread position: | 2-376 |
| Cow position: | chrX:25309869-25310243 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 91 |
| Conread position: | 2-376 |
| Cow position: | chrX:25325104-25324730 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-378 |
| Cow position: | chrX:25325272-25324896 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-384 |
| Cow position: | chrX:25310037-25310419 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 75 |
| Conread position: | 2-384 |
| Cow position: | chrX:25325776-25325394 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 247 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-384 |
| Cow position: | chrX:29045113-29044731 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 2-384 |
| Cow position: | chrX:29045197-29044815 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 41 |
| Conread position: | 3-384 |
| Cow position: | chrX:12627586-12627966 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 3-384 |
| Cow position: | chrX:29045361-29044983 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 15-384 |
| Cow position: | chrX:13826872-13826503 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 17-314 |
| Cow position: | chrX:12627433-12627728 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 56 |
| Conread position: | 17-376 |
| Cow position: | chrX:25309716-25310075 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 18-376 |
| Cow position: | chrX:29045832-29045474 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 20-366 |
| Cow position: | chrX:13826783-13826437 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 20-375 |
| Cow position: | chrX:14181309-14180954 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 151, 145 |
| Conread position: | 22-384 |
| Cow position: | chrX:12627270-12627631 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 129 |
| Conread position: | 83-384 |
| Cow position: | chrX:14181330-14181029 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 67 |
| Conread position: | 98-377 |
| Cow position: | chrX:25309713-25309992 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 226, 205 |
Show alignments to all cow chromosomes.