Cow genome map
| Conread name: | Ss1.1-reep02c_e6.5.5 |
| Conread position: | 221-564 |
| Cow position: | chr19:33814812-33815167 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 75, 141 |
| Conread position: | 233-498 |
| Cow position: | chr19:33770537-33770814 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 234-504 |
| Cow position: | chr19:33974151-33974421 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 123 |
| Conread position: | 245-507 |
| Cow position: | chr19:33829337-33829593 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 368-504 |
| Cow position: | chr19:33927621-33927757 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-504 |
| Cow position: | chr19:33898622-33898755 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-504 |
| Cow position: | chr19:33911294-33911427 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-467 |
| Cow position: | chr19:33695750-33695844 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-574 |
| Cow position: | chr19:33754431-33754629 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 181, 147 |
| Conread position: | 645-818 |
| Cow position: | chr19:33772617-33772790 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 653-815 |
| Cow position: | chr19:33900192-33900354 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 654-818 |
| Cow position: | chr19:33816409-33816573 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 655-822 |
| Cow position: | chr19:33913214-33913381 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 658-815 |
| Cow position: | chr19:33928772-33928929 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 659-815 |
| Cow position: | chr19:33975616-33975772 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 132 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 813-966 |
| Cow position: | chr19:33832418-33832571 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 843-966 |
| Cow position: | chr19:33773670-33773793 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1112-1294 |
| Cow position: | chr19:33933292-33933474 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1112-1311 |
| Cow position: | chr19:33835706-33835905 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1112-1311 |
| Cow position: | chr19:33977004-33977203 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1112-1316 |
| Cow position: | chr19:33774142-33774346 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 1112-1317 |
| Cow position: | chr19:33902672-33902877 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1112-1324 |
| Cow position: | chr19:33589478-33589690 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1124-1312 |
| Cow position: | chr19:33604871-33605059 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.