Cow genome map
| Conread name: | Ss1.1-reje28b_k1.5 |
| Conread position: | 1-551 |
| Cow position: | chr13:56333505-56334057 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 336 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 11, 167 |
| Conread position: | 3-320 |
| Cow position: | chr13:39930860-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 281 |
| Conread position: | 3-493 |
| Cow position: | chr13:56292311-56291830 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 7, 112 |
| Conread position: | 8-281 |
| Cow position: | chr13:56292064-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 8-489 |
| Cow position: | chr13:22125147-22125628 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 111, 121 |
| Conread position: | 8-489 |
| Cow position: | chr13:24162873-24163354 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 111, 121 |
| Conread position: | 8-537 |
| Cow position: | chr13:56333766-56334304 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 329 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 8-561 |
| Cow position: | chr13:39984034-39984587 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 341 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 387, 392 |
| Conread position: | 9-416 |
| Cow position: | chr13:39984455-39984862 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 218, 225 |
| Conread position: | 9-493 |
| Cow position: | chr13:39984371-39984855 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 283, 291 |
| Conread position: | 9-545 |
| Cow position: | chr13:39984287-39984823 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 327 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 134, 142 |
| Conread position: | 10-289 |
| Cow position: | chr13:39984624-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-342 |
| Cow position: | chr13:56292146-56291813 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 10-369 |
| Cow position: | chr13:39984540-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 10-562 |
| Cow position: | chr13:39983952-39984504 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 336 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 279, 289 |
| Conread position: | 17-561 |
| Cow position: | chr13:56333607-56334160 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 330 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 237, 246 |
| Conread position: | 20-488 |
| Cow position: | chr13:39930710-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 301 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 312, 322 |
| Conread position: | 20-531 |
| Cow position: | chr13:22124907-22125418 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 169, 159 |
| Conread position: | 20-531 |
| Cow position: | chr13:24162633-24163144 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 202, 184 |
| Conread position: | 21-562 |
| Cow position: | chr13:39930627-39931166 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 321 |
| Conread position: | 24-539 |
| Cow position: | chr13:56292877-56292368 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 141, 23 |
| Conread position: | 24-554 |
| Cow position: | chr13:56333698-56334238 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 340 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 104, 117 |
| Conread position: | 61-561 |
| Cow position: | chr13:56292336-56291846 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 101, 94 |
| Conread position: | 62-530 |
| Cow position: | chr13:39930584-39931052 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 273, 280 |
Show alignments to all cow chromosomes.