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Cow genome map

           
Conread name:
           
Ss1.1-reje28b_k1.5
        

               
Conread position:
               
1-194
               

               
Cow position:
               
chr18:53572375-53572568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:56494227-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 274
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:33063967-33063588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
69, 77
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:53571942-53572320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
287, 62
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr18:53560393-53560820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 295
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr18:55523859-55524331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 81
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr18:43093287-43092791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 308
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:40306802-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 179
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:33064303-33063762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 165
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr18:50099357-50099902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr18:53498268-53498818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 184
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr18:56433348-56433892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr18:55067063-55066510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 430
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr18:51789426-51788866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 184
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:53559973-53560534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 295
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:53586532-53585971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:53586952-53586391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 82
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:54966912-54967475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:55066979-55066418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 299
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:55523523-55524084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 80
               

               
Conread position:
               
1-880
               

               
Cow position:
               
chr18:55066895-55066017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
882
               

               
Alignm identity:
               
778
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
624, 586
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr18:55524111-55524339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 155
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr18:51765194-51764905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
187, 183
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr18:51751866-51751515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
2-383
               

               
Cow position:
               
chr18:53526076-53526455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
160, 154
               

               
Conread position:
               
2-485
               

               
Cow position:
               
chr18:33064049-33063566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:41198211-41198702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 141
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:51752119-51751628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
2-511
               

               
Cow position:
               
chr18:53509538-53510046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 267
               

               
Conread position:
               
2-539
               

               
Cow position:
               
chr18:43168007-43168545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 253
               

               
Conread position:
               
2-540
               

               
Cow position:
               
chr18:1418050-1418588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 117
               

               
Conread position:
               
2-540
               

               
Cow position:
               
chr18:50058988-50058451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
2-540
               

               
Cow position:
               
chr18:50271593-50272131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 340
               

               
Conread position:
               
2-540
               

               
Cow position:
               
chr18:50848886-50849425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
8, 175
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr18:53498609-53499153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 5
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr18:43093454-43092901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 304
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr18:53586783-53586230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 343
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr18:53587119-53586566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 249
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr18:41197623-41198182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 297
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr18:43167504-43168063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr18:43167923-43168483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr18:51789341-51788782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
184, 174
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr18:51812584-51812025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
179, 174
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr18:54967086-54967643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 19
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr18:42827536-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 154
               

               
Conread position:
               
3-481
               

               
Cow position:
               
chr18:14453972-14453493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 256
               

               
Conread position:
               
3-488
               

               
Cow position:
               
chr18:43168092-43168577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 307
               

               
Conread position:
               
3-488
               

               
Cow position:
               
chr18:50848971-50849457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 148
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr18:50099695-50100186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 92
               

               
Conread position:
               
3-497
               

               
Cow position:
               
chr18:50848635-50849130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 261
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr18:50059575-50059023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 257
               

               
Conread position:
               
3-554
               

               
Cow position:
               
chr18:53635912-53635359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
3-561
               

               
Cow position:
               
chr18:56493722-56494283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
4-561
               

               
Cow position:
               
chr18:43120020-43119464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 8
               

               
Conread position:
               
4-562
               

               
Cow position:
               
chr18:54966833-54967391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 292
               

               
Conread position:
               
4-562
               

               
Cow position:
               
chr18:54993289-54993848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 293
               

               
Conread position:
               
5-540
               

               
Cow position:
               
chr18:52012224-52011689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 339
               

               
Conread position:
               
5-542
               

               
Cow position:
               
chr18:43022767-43022231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
248, 7
               

               
Conread position:
               
6-463
               

               
Cow position:
               
chr18:42837547-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
6-493
               

               
Cow position:
               
chr18:42960246-42959760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
6-516
               

               
Cow position:
               
chr18:42959910-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
6-541
               

               
Cow position:
               
chr18:41949043-41948509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
6-542
               

               
Cow position:
               
chr18:44239810-44240345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
121, 6
               

               
Conread position:
               
6-542
               

               
Cow position:
               
chr18:56316185-56316721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 293
               

               
Conread position:
               
6-553
               

               
Cow position:
               
chr18:41948875-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 6
               

               
Conread position:
               
6-553
               

               
Cow position:
               
chr18:49022614-49023162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
6-555
               

               
Cow position:
               
chr18:55523360-55523909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 225
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr18:42959994-42959449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
174, 6
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr18:43120270-43119716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 6
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr18:43175471-43174917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 6
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr18:52012139-52011584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
167, 174
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr18:56493896-56494451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
6-565
               

               
Cow position:
               
chr18:43022514-43021959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 6
               

               
Conread position:
               
7-372
               

               
Cow position:
               
chr18:56494149-56494514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 289
               

               
Conread position:
               
7-380
               

               
Cow position:
               
chr18:40075328-40075701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
280, 292
               

               
Conread position:
               
7-484
               

               
Cow position:
               
chr18:40306725-40307203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
7-486
               

               
Cow position:
               
chr18:53586358-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 293
               

               
Conread position:
               
7-492
               

               
Cow position:
               
chr18:50049086-50048601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
7-541
               

               
Cow position:
               
chr18:44154314-44153787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
7-545
               

               
Cow position:
               
chr18:53498022-53498563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 351
               

               
Conread position:
               
7-554
               

               
Cow position:
               
chr18:51789253-51788704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
7-555
               

               
Cow position:
               
chr18:53525829-53526377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 289
               

               
Conread position:
               
7-559
               

               
Cow position:
               
chr18:51812496-51811943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr18:42985508-42984953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 168
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr18:52427937-52428492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr18:52433286-52433841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 254
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr18:52447580-52448135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 188
               

               
Conread position:
               
7-562
               

               
Cow position:
               
chr18:44184581-44184026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
7-562
               

               
Cow position:
               
chr18:50048918-50048363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
116, 103
               

               
Conread position:
               
7-562
               

               
Cow position:
               
chr18:53586610-53586055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
7-562
               

               
Cow position:
               
chr18:55018017-55018572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 152
               

               
Conread position:
               
7-563
               

               
Cow position:
               
chr18:53509375-53509931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 289
               

               
Conread position:
               
7-568
               

               
Cow position:
               
chr18:54979948-54980510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 290
               

               
Conread position:
               
8-332
               

               
Cow position:
               
chr18:43048674-43048350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
226, 222
               

               
Conread position:
               
8-410
               

               
Cow position:
               
chr18:33092884-33092482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
255, 243
               

               
Conread position:
               
8-463
               

               
Cow position:
               
chr18:42744243-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 251
               

               
Conread position:
               
8-465
               

               
Cow position:
               
chr18:44184412-44183955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
256, 249
               

               
Conread position:
               
8-485
               

               
Cow position:
               
chr18:41198301-41198780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 341
               

               
Conread position:
               
8-492
               

               
Cow position:
               
chr18:40324074-40323610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
167, 126
               

               
Conread position:
               
8-495
               

               
Cow position:
               
chr18:51838732-51838250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
226, 141
               

               
Conread position:
               
8-500
               

               
Cow position:
               
chr18:51874194-51874686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 168
               

               
Conread position:
               
8-519
               

               
Cow position:
               
chr18:42837630-42837119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-530
               

               
Cow position:
               
chr18:42693490-42692968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
177, 181
               

               
Conread position:
               
8-530
               

               
Cow position:
               
chr18:42693910-42693388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
181, 168
               

               
Conread position:
               
8-542
               

               
Cow position:
               
chr18:52428191-52428725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 158
               

               
Conread position:
               
8-542
               

               
Cow position:
               
chr18:52433372-52433906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 158
               

               
Conread position:
               
8-545
               

               
Cow position:
               
chr18:33064380-33063843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
8-545
               

               
Cow position:
               
chr18:41197881-41198418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 246
               

               
Conread position:
               
8-551
               

               
Cow position:
               
chr18:42744411-42743868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 298
               

               
Conread position:
               
8-554
               

               
Cow position:
               
chr18:54979446-54979992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 172
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:40086715-40086161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:41197713-41198266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 414
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:43093940-43093399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 170
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:51368464-51367911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
263, 243
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:51789839-51789286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
172, 167
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:51812998-51812445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
181, 167
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:52447162-52447715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
172, 167
               

               
Conread position:
               
8-561
               

               
Cow position:
               
chr18:52447414-52447967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 291
               

               
Conread position:
               
8-562
               

               
Cow position:
               
chr18:54992706-54993260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 161
               

               
Conread position:
               
8-562
               

               
Cow position:
               
chr18:55017769-55018320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 19
               

               
Conread position:
               
8-562
               

               
Cow position:
               
chr18:55017934-55018488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 145
               

               
Conread position:
               
8-568
               

               
Cow position:
               
chr18:44398301-44397741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 292
               

               
Conread position:
               
8-793
               

               
Cow position:
               
chr18:40075161-40075955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 284
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr18:56247346-56247070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
261, 202
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr18:44253261-44252945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
9-414
               

               
Cow position:
               
chr18:51969646-51970042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
253, 158
               

               
Conread position:
               
9-414
               

               
Cow position:
               
chr18:53635317-53634913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
317, 289
               

               
Conread position:
               
9-453
               

               
Cow position:
               
chr18:56316524-56316968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 171
               

               
Conread position:
               
9-462
               

               
Cow position:
               
chr18:44397964-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 142
               

               
Conread position:
               
9-464
               

               
Cow position:
               
chr18:42674846-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
9-477
               

               
Cow position:
               
chr18:43174965-43174497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 250
               

               
Conread position:
               
9-489
               

               
Cow position:
               
chr18:51765691-51765211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
9-489
               

               
Cow position:
               
chr18:53610160-53609681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
9-491
               

               
Cow position:
               
chr18:56128260-56128742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-493
               

               
Cow position:
               
chr18:41197546-41198030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 287
               

               
Conread position:
               
9-493
               

               
Cow position:
               
chr18:42675182-42674698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 167
               

               
Conread position:
               
9-497
               

               
Cow position:
               
chr18:40324409-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 161
               

               
Conread position:
               
9-497
               

               
Cow position:
               
chr18:42675014-42674526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 167
               

               
Conread position:
               
9-497
               

               
Cow position:
               
chr18:51789166-51788678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
180, 169
               

               
Conread position:
               
9-506
               

               
Cow position:
               
chr18:51812409-51811913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
250, 260
               

               
Conread position:
               
9-518
               

               
Cow position:
               
chr18:51789670-51789161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 171
               

               
Conread position:
               
9-519
               

               
Cow position:
               
chr18:51812913-51812403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
9-540
               

               
Cow position:
               
chr18:51789502-51788971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 291
               

               
Conread position:
               
9-540
               

               
Cow position:
               
chr18:51812745-51812214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 291
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:42985421-42984889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
9-542
               

               
Cow position:
               
chr18:42985085-42984552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
9-542
               

               
Cow position:
               
chr18:44240148-44240681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
9-542
               

               
Cow position:
               
chr18:51368379-51367846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
149, 178
               

               
Conread position:
               
9-542
               

               
Cow position:
               
chr18:56329376-56328843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 340
               

               
Conread position:
               
9-545
               

               
Cow position:
               
chr18:43167847-43168383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
110, 122
               

               
Conread position:
               
9-545
               

               
Cow position:
               
chr18:51400419-51400955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
280, 290
               

               
Conread position:
               
9-546
               

               
Cow position:
               
chr18:42693741-42693208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
328, 333
               

               
Conread position:
               
9-548
               

               
Cow position:
               
chr18:49021622-49022162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
248, 254
               

               
Conread position:
               
9-549
               

               
Cow position:
               
chr18:53610412-53609871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
331, 314
               

               
Conread position:
               
9-554
               

               
Cow position:
               
chr18:56128176-56128722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:41949209-41948657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:42744494-42743942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 291
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:42985169-42984617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:44239896-44240448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 245
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:44253668-44253129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 151
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:44398132-44397580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 171
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:44398216-44397664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 248
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:51789754-51789202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:51812661-51812109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 176
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:56247674-56247132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
9-562
               

               
Cow position:
               
chr18:40306392-40306945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 298
               

               
Conread position:
               
9-562
               

               
Cow position:
               
chr18:41949293-41948740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 250
               

               
Conread position:
               
9-562
               

               
Cow position:
               
chr18:53559813-53560366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 169
               

               
Conread position:
               
9-562
               

               
Cow position:
               
chr18:53586692-53586139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 287
               

               
Conread position:
               
9-563
               

               
Cow position:
               
chr18:49032991-49032437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 300
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr18:50084010-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
179, 171
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr18:51873675-51873950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr18:50246553-50246842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
164, 156
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr18:55009119-55009415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
272, 210
               

               
Conread position:
               
10-325
               

               
Cow position:
               
chr18:49032318-49032003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
167, 149
               

               
Conread position:
               
10-334
               

               
Cow position:
               
chr18:56128933-56129255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 49
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr18:55523952-55524338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
281, 289
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr18:51765354-51764954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
253, 242
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr18:51839253-51838840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
254, 244
               

               
Conread position:
               
10-459
               

               
Cow position:
               
chr18:56329291-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 408
               

               
Conread position:
               
10-492
               

               
Cow position:
               
chr18:43119931-43119449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
10-493
               

               
Cow position:
               
chr18:50059399-50058916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 166
               

               
Conread position:
               
10-493
               

               
Cow position:
               
chr18:51765438-51764955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
282, 290
               

               
Conread position:
               
10-500
               

               
Cow position:
               
chr18:40324744-40324254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 166
               

               
Conread position:
               
10-528
               

               
Cow position:
               
chr18:56128597-56129115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 241
               

               
Conread position:
               
10-537
               

               
Cow position:
               
chr18:42674929-42674402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 296
               

               
Conread position:
               
10-537
               

               
Cow position:
               
chr18:51400588-51401115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
281, 289
               

               
Conread position:
               
10-537
               

               
Cow position:
               
chr18:51874119-51874639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
171, 40
               

               
Conread position:
               
10-542
               

               
Cow position:
               
chr18:53635568-53635036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 255
               

               
Conread position:
               
10-554
               

               
Cow position:
               
chr18:53636072-53635527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 166
               

               
Conread position:
               
10-554
               

               
Cow position:
               
chr18:54992960-54993504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 286
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr18:40324828-40324277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 249
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr18:41198135-41198686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 289
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr18:43093695-43093147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 23
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr18:44398383-44397832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 166
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr18:49033074-49032523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 296
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr18:56329711-56329160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
10-562
               

               
Cow position:
               
chr18:40306225-40306777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
10-562
               

               
Cow position:
               
chr18:50083338-50083890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
253, 239
               

               
Conread position:
               
10-562
               

               
Cow position:
               
chr18:56329543-56328991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 166
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr18:44184157-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr18:14453147-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-372
               

               
Cow position:
               
chr18:49022955-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-380
               

               
Cow position:
               
chr18:42959747-42959377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
282, 295
               

               
Conread position:
               
11-397
               

               
Cow position:
               
chr18:1418227-1418613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 165
               

               
Conread position:
               
11-458
               

               
Cow position:
               
chr18:44240402-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
280, 288
               

               
Conread position:
               
11-493
               

               
Cow position:
               
chr18:50099032-50099514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 155
               

               
Conread position:
               
11-503
               

               
Cow position:
               
chr18:43175047-43174555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 168
               

               
Conread position:
               
11-510
               

               
Cow position:
               
chr18:56329962-56329463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
162, 169
               

               
Conread position:
               
11-515
               

               
Cow position:
               
chr18:44253834-44253331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 248
               

               
Conread position:
               
11-535
               

               
Cow position:
               
chr18:49032569-49032045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
11-540
               

               
Cow position:
               
chr18:49032905-49032376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
11-542
               

               
Cow position:
               
chr18:42984999-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
11-542
               

               
Cow position:
               
chr18:44154226-44153702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 209
               

               
Conread position:
               
11-545
               

               
Cow position:
               
chr18:42675432-42674898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 246
               

               
Conread position:
               
11-548
               

               
Cow position:
               
chr18:50281815-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 338
               

               
Conread position:
               
11-548
               

               
Cow position:
               
chr18:53525749-53526286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 285
               

               
Conread position:
               
11-549
               

               
Cow position:
               
chr18:51367873-51367335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
11-549
               

               
Cow position:
               
chr18:56330046-56329507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 252
               

               
Conread position:
               
11-551
               

               
Cow position:
               
chr18:49033157-49032617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 166
               

               
Conread position:
               
11-553
               

               
Cow position:
               
chr18:50099536-50100079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
253, 243
               

               
Conread position:
               
11-554
               

               
Cow position:
               
chr18:55523617-55524160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 82
               

               
Conread position:
               
11-555
               

               
Cow position:
               
chr18:50271518-50272062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 288
               

               
Conread position:
               
11-555
               

               
Cow position:
               
chr18:56433944-56434478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:33064461-33063911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 342
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:41949375-41948825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 165
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:43022678-43022128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:43022930-43022380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 162
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:43120182-43119632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:43175131-43174581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 165
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:43175215-43174665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 248
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:43175551-43175001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 210
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:44239730-44240280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:51969164-51969694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
201, 76
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52012386-52011836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
280, 288
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52428026-52428576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 323
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52428278-52428828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 155
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52428446-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 238
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52433459-52434009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 165
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52433627-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 238
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52447333-52447883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52447501-52448051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 288
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52447669-52448219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 288
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:52447753-52448304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 414
               

               
Conread position:
               
11-561
               

               
Cow position:
               
chr18:56329794-56329244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
11-562
               

               
Cow position:
               
chr18:53509295-53509846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 285
               

               
Conread position:
               
11-562
               

               
Cow position:
               
chr18:56329458-56328907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 246
               

               
Conread position:
               
11-568
               

               
Cow position:
               
chr18:40324659-40324102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
11-601
               

               
Cow position:
               
chr18:56316274-56316866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 145
               

               
Conread position:
               
12-497
               

               
Cow position:
               
chr18:44398045-44397560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 164
               

               
Conread position:
               
12-500
               

               
Cow position:
               
chr18:52427859-52428347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
12-503
               

               
Cow position:
               
chr18:52427607-52428098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
74, 79
               

               
Conread position:
               
12-539
               

               
Cow position:
               
chr18:49032652-49032125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 295
               

               
Conread position:
               
12-540
               

               
Cow position:
               
chr18:43167766-43168294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 208
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr18:54967259-54967800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr18:54992792-54993336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
12-561
               

               
Cow position:
               
chr18:42837710-42837161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 288
               

               
Conread position:
               
12-561
               

               
Cow position:
               
chr18:42837794-42837245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 247
               

               
Conread position:
               
12-561
               

               
Cow position:
               
chr18:42837878-42837329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 406
               

               
Conread position:
               
12-561
               

               
Cow position:
               
chr18:43175298-43174749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 164
               

               
Conread position:
               
12-561
               

               
Cow position:
               
chr18:51765520-51764971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 286
               

               
Conread position:
               
12-561
               

               
Cow position:
               
chr18:52433208-52433757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
12-561
               

               
Cow position:
               
chr18:55008533-55009082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
12-562
               

               
Cow position:
               
chr18:40306563-40307113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 287
               

               
Conread position:
               
12-562
               

               
Cow position:
               
chr18:54967007-54967559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 286
               

               
Conread position:
               
12-562
               

               
Cow position:
               
chr18:54979784-54980336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
12-562
               

               
Cow position:
               
chr18:55008451-55008999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 105
               

               
Conread position:
               
12-573
               

               
Cow position:
               
chr18:40306647-40307208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
499, 487
               

               
Conread position:
               
13-561
               

               
Cow position:
               
chr18:51368628-51368079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
14-492
               

               
Cow position:
               
chr18:40306481-40306959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 292
               

               
Conread position:
               
16-349
               

               
Cow position:
               
chr18:51367534-51367200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
5, 235
               

               
Conread position:
               
16-539
               

               
Cow position:
               
chr18:49033236-49032713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 291
               

               
Conread position:
               
16-542
               

               
Cow position:
               
chr18:50848063-50848587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
17-419
               

               
Cow position:
               
chr18:55018447-55018852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 142
               

               
Conread position:
               
17-461
               

               
Cow position:
               
chr18:40306904-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
274, 279
               

               
Conread position:
               
17-492
               

               
Cow position:
               
chr18:44154388-44153914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
17-492
               

               
Cow position:
               
chr18:52012044-52011569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
360, 385
               

               
Conread position:
               
17-493
               

               
Cow position:
               
chr18:49032479-49032003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 250
               

               
Conread position:
               
17-540
               

               
Cow position:
               
chr18:53635981-53635458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
17-540
               

               
Cow position:
               
chr18:56329620-56329097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 246
               

               
Conread position:
               
17-540
               

               
Cow position:
               
chr18:56493991-56494514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 279
               

               
Conread position:
               
17-541
               

               
Cow position:
               
chr18:33064203-33063679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
17-542
               

               
Cow position:
               
chr18:44253492-44252981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
108, 115
               

               
Conread position:
               
17-542
               

               
Cow position:
               
chr18:49032815-49032290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-545
               

               
Cow position:
               
chr18:40324485-40323957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 274
               

               
Conread position:
               
17-545
               

               
Cow position:
               
chr18:42744654-42744126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 163
               

               
Conread position:
               
17-548
               

               
Cow position:
               
chr18:33064119-33063588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 234
               

               
Conread position:
               
17-554
               

               
Cow position:
               
chr18:40086201-40085670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
163, 153
               

               
Conread position:
               
17-561
               

               
Cow position:
               
chr18:42960482-42959944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
142, 103
               

               
Conread position:
               
17-562
               

               
Cow position:
               
chr18:40075002-40075547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-562
               

               
Cow position:
               
chr18:42790943-42791488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 159
               

               
Conread position:
               
17-562
               

               
Cow position:
               
chr18:53586852-53586307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 335
               

               
Conread position:
               
17-562
               

               
Cow position:
               
chr18:54993135-54993680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 246
               

               
Conread position:
               
18-372
               

               
Cow position:
               
chr18:14453224-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 288
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr18:50849071-50849476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
171, 158
               

               
Conread position:
               
18-474
               

               
Cow position:
               
chr18:53571875-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 124
               

               
Conread position:
               
18-528
               

               
Cow position:
               
chr18:50098955-50099465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
242, 228
               

               
Conread position:
               
18-547
               

               
Cow position:
               
chr18:49022710-49023238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 158
               

               
Conread position:
               
18-549
               

               
Cow position:
               
chr18:53610235-53609704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
274, 289
               

               
Conread position:
               
18-553
               

               
Cow position:
               
chr18:50848231-50848767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
18-561
               

               
Cow position:
               
chr18:43093606-43093063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 282
               

               
Conread position:
               
18-561
               

               
Cow position:
               
chr18:44398459-44397916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 239
               

               
Conread position:
               
18-562
               

               
Cow position:
               
chr18:42675257-42674713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
18-562
               

               
Cow position:
               
chr18:53559738-53560282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
19-474
               

               
Cow position:
               
chr18:42792457-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 244
               

               
Conread position:
               
19-492
               

               
Cow position:
               
chr18:53635475-53635003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 287
               

               
Conread position:
               
19-492
               

               
Cow position:
               
chr18:56128690-56129162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 148
               

               
Conread position:
               
19-494
               

               
Cow position:
               
chr18:56247499-56247035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
162, 37
               

               
Conread position:
               
19-521
               

               
Cow position:
               
chr18:42827469-42827976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 157
               

               
Conread position:
               
19-540
               

               
Cow position:
               
chr18:33064873-33064352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 281
               

               
Conread position:
               
19-542
               

               
Cow position:
               
chr18:49032729-49032206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 281
               

               
Conread position:
               
19-545
               

               
Cow position:
               
chr18:42791785-42792311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
19-545
               

               
Cow position:
               
chr18:42792289-42792815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 280
               

               
Conread position:
               
19-548
               

               
Cow position:
               
chr18:42791953-42792482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 157
               

               
Conread position:
               
19-548
               

               
Cow position:
               
chr18:53509471-53509998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
19-552
               

               
Cow position:
               
chr18:53525925-53526456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
19-555
               

               
Cow position:
               
chr18:53498202-53498741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 263
               

               
Conread position:
               
19-561
               

               
Cow position:
               
chr18:33064705-33064163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
19-561
               

               
Cow position:
               
chr18:42791197-42791739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 277
               

               
Conread position:
               
19-561
               

               
Cow position:
               
chr18:42791365-42791907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 134
               

               
Conread position:
               
19-561
               

               
Cow position:
               
chr18:49022377-49022917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
19-561
               

               
Cow position:
               
chr18:56433449-56433990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
446, 206
               

               
Conread position:
               
19-568
               

               
Cow position:
               
chr18:54967686-54968232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
20-325
               

               
Cow position:
               
chr18:51368116-51367811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
241, 216
               

               
Conread position:
               
20-357
               

               
Cow position:
               
chr18:50084104-50084443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
180, 209
               

               
Conread position:
               
20-409
               

               
Cow position:
               
chr18:44253334-44252946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
20-463
               

               
Cow position:
               
chr18:53498542-53498986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 328
               

               
Conread position:
               
20-488
               

               
Cow position:
               
chr18:56494078-56494543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 402
               

               
Conread position:
               
20-493
               

               
Cow position:
               
chr18:50099461-50099934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
271, 279
               

               
Conread position:
               
20-497
               

               
Cow position:
               
chr18:50048821-50048344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
181, 174
               

               
Conread position:
               
20-497
               

               
Cow position:
               
chr18:50083768-50084245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 322
               

               
Conread position:
               
20-502
               

               
Cow position:
               
chr18:1417984-1418466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
20-520
               

               
Cow position:
               
chr18:50246395-50246890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
20-540
               

               
Cow position:
               
chr18:49022796-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 211
               

               
Conread position:
               
20-542
               

               
Cow position:
               
chr18:51765848-51765326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
20-545
               

               
Cow position:
               
chr18:53560244-53560769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
20-546
               

               
Cow position:
               
chr18:42693646-42693124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
329, 325
               

               
Conread position:
               
20-548
               

               
Cow position:
               
chr18:42791450-42791978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 276
               

               
Conread position:
               
20-549
               

               
Cow position:
               
chr18:50059473-50058943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
244, 239
               

               
Conread position:
               
20-549
               

               
Cow position:
               
chr18:50295254-50295784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
20-553
               

               
Cow position:
               
chr18:42792206-42792740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 276
               

               
Conread position:
               
20-555
               

               
Cow position:
               
chr18:55523794-55524329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
20-561
               

               
Cow position:
               
chr18:44184652-44184111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 317
               

               
Conread position:
               
20-561
               

               
Cow position:
               
chr18:44239991-44240532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
20-561
               

               
Cow position:
               
chr18:49033316-49032775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:42791616-42792160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 245
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:50049159-50048615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 233
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:50083432-50083974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 276
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:50083684-50084226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 279
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:50246227-50246769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
238, 226
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:50848401-50848943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:53560160-53560702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 276
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:53587017-53586475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 147
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:53635810-53635268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 160
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:54993054-54993596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 139
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:56128355-56128897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 160
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:56330121-56329579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
273, 288
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:56434447-56434989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 269
               

               
Conread position:
               
20-568
               

               
Cow position:
               
chr18:43093352-43092805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 160
               

               
Conread position:
               
21-479
               

               
Cow position:
               
chr18:1418151-1418611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
21-546
               

               
Cow position:
               
chr18:42694065-42693543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
167, 157
               

               
Conread position:
               
21-561
               

               
Cow position:
               
chr18:56248176-56247626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 279
               

               
Conread position:
               
22-410
               

               
Cow position:
               
chr18:50030833-50030440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 282
               

               
Conread position:
               
22-553
               

               
Cow position:
               
chr18:50099632-50100163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 10
               

               
Conread position:
               
22-558
               

               
Cow position:
               
chr18:55018366-55018903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 233
               

               
Conread position:
               
22-562
               

               
Cow position:
               
chr18:56434282-56434820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
23-554
               

               
Cow position:
               
chr18:56128107-56128638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
153, 7
               

               
Conread position:
               
23-561
               

               
Cow position:
               
chr18:42827389-42827929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 198
               

               
Conread position:
               
23-561
               

               
Cow position:
               
chr18:52427534-52428072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
106, 101
               

               
Conread position:
               
23-561
               

               
Cow position:
               
chr18:52432883-52433421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 101
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr18:50271951-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 136
               

               
Conread position:
               
24-331
               

               
Cow position:
               
chr18:51765256-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
159, 142
               

               
Conread position:
               
24-333
               

               
Cow position:
               
chr18:50295594-50295905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
147, 141
               

               
Conread position:
               
24-401
               

               
Cow position:
               
chr18:54980386-54980761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
138, 132
               

               
Conread position:
               
24-542
               

               
Cow position:
               
chr18:50083520-50084038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
24-542
               

               
Cow position:
               
chr18:56247921-56247399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
24-561
               

               
Cow position:
               
chr18:42837950-42837413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 275
               

               
Conread position:
               
24-561
               

               
Cow position:
               
chr18:43120337-43119800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
24-561
               

               
Cow position:
               
chr18:51752181-51751644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
265, 275
               

               
Conread position:
               
24-562
               

               
Cow position:
               
chr18:42791874-42792412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 318
               

               
Conread position:
               
24-562
               

               
Cow position:
               
chr18:50059133-50058595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
165, 152
               

               
Conread position:
               
24-562
               

               
Cow position:
               
chr18:50059301-50058763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 131
               

               
Conread position:
               
24-567
               

               
Cow position:
               
chr18:55018118-55018661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
24-569
               

               
Cow position:
               
chr18:22634626-22635171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
25-545
               

               
Cow position:
               
chr18:53498464-53498984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
25-555
               

               
Cow position:
               
chr18:33093119-33092589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
25-562
               

               
Cow position:
               
chr18:55008630-55009167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 128
               

               
Conread position:
               
26-302
               

               
Cow position:
               
chr18:22634964-22635242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
261, 0
               

               
Conread position:
               
26-332
               

               
Cow position:
               
chr18:51874380-51874686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
26-389
               

               
Cow position:
               
chr18:44184310-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
153, 147
               

               
Conread position:
               
26-408
               

               
Cow position:
               
chr18:51367607-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
163, 152
               

               
Conread position:
               
26-421
               

               
Cow position:
               
chr18:51789065-51788670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
265, 273
               

               
Conread position:
               
26-458
               

               
Cow position:
               
chr18:42984900-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
26-458
               

               
Cow position:
               
chr18:55008967-55009398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
133, 144
               

               
Conread position:
               
26-476
               

               
Cow position:
               
chr18:54980304-54980752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 226
               

               
Conread position:
               
26-493
               

               
Cow position:
               
chr18:33092950-33092483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
238, 233
               

               
Conread position:
               
26-493
               

               
Cow position:
               
chr18:50099131-50099598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 56
               

               
Conread position:
               
26-497
               

               
Cow position:
               
chr18:41198067-41198538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 401
               

               
Conread position:
               
26-497
               

               
Cow position:
               
chr18:50059047-50058576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
238, 233
               

               
Conread position:
               
26-497
               

               
Cow position:
               
chr18:51766093-51765622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
26-500
               

               
Cow position:
               
chr18:56434117-56434591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 161
               

               
Conread position:
               
26-501
               

               
Cow position:
               
chr18:51969581-51970045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
26-502
               

               
Cow position:
               
chr18:40074927-40075403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 270
               

               
Conread position:
               
26-521
               

               
Cow position:
               
chr18:43048740-43048246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 280
               

               
Conread position:
               
26-525
               

               
Cow position:
               
chr18:53560334-53560829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 270
               

               
Conread position:
               
26-526
               

               
Cow position:
               
chr18:42694146-42693644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
26-532
               

               
Cow position:
               
chr18:51368194-51367689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
159, 150
               

               
Conread position:
               
26-537
               

               
Cow position:
               
chr18:22634712-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 158
               

               
Conread position:
               
26-537
               

               
Cow position:
               
chr18:42985572-42985061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
26-540
               

               
Cow position:
               
chr18:41197815-41198329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 273
               

               
Conread position:
               
26-540
               

               
Cow position:
               
chr18:42960311-42959797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
26-541
               

               
Cow position:
               
chr18:42792380-42792895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
265, 273
               

               
Conread position:
               
26-542
               

               
Cow position:
               
chr18:33064614-33064098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 226
               

               
Conread position:
               
26-542
               

               
Cow position:
               
chr18:42744309-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 247
               

               
Conread position:
               
26-545
               

               
Cow position:
               
chr18:41197983-41198502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 270
               

               
Conread position:
               
26-545
               

               
Cow position:
               
chr18:50022586-50022064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
26-545
               

               
Cow position:
               
chr18:51752263-51751744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 142
               

               
Conread position:
               
26-545
               

               
Cow position:
               
chr18:51969413-51969921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
26-553
               

               
Cow position:
               
chr18:42791120-42791648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 316
               

               
Conread position:
               
26-553
               

               
Cow position:
               
chr18:51789904-51789377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
26-553
               

               
Cow position:
               
chr18:54967191-54967716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 144
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr18:33093034-33092505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr18:44184478-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 150
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr18:54967860-54968386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 172
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr18:54979632-54980160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 270
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr18:55008715-55009244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr18:55008799-55009327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
26-555
               

               
Cow position:
               
chr18:54967776-54968303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 255
               

               
Conread position:
               
26-560
               

               
Cow position:
               
chr18:54993564-54994096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 75
               

               
Conread position:
               
26-561
               

               
Cow position:
               
chr18:40324560-40324025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
26-561
               

               
Cow position:
               
chr18:42675081-42674546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 154
               

               
Conread position:
               
26-561
               

               
Cow position:
               
chr18:44254067-44253536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:22634546-22635080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:40075095-40075631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 270
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:41949108-41948572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 233
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:42675333-42674797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 150
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:42791708-42792244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 150
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:42792128-42792664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:50021992-50021453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:50022331-50021792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:50848491-50849027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 273
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:53560082-53560618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 270
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:54979716-54980252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 144
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:54992892-54993428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 141
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:54993228-54993764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 144
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:55017868-55018404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:55018204-55018741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 143
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:55523464-55524000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 270
               

               
Conread position:
               
26-563
               

               
Cow position:
               
chr18:50848743-50849280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
26-563
               

               
Cow position:
               
chr18:54968026-54968564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
27-369
               

               
Cow position:
               
chr18:50099972-50100314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
27-385
               

               
Cow position:
               
chr18:50271786-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
185, 194
               

               
Conread position:
               
27-415
               

               
Cow position:
               
chr18:50083859-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 272
               

               
Conread position:
               
27-421
               

               
Cow position:
               
chr18:50295513-50295906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
27-492
               

               
Cow position:
               
chr18:56247740-56247283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 231
               

               
Conread position:
               
27-493
               

               
Cow position:
               
chr18:50099804-50100270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
27-493
               

               
Cow position:
               
chr18:50250910-50251370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
162, 20
               

               
Conread position:
               
27-497
               

               
Cow position:
               
chr18:50021907-50021433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
27-497
               

               
Cow position:
               
chr18:51368277-51367807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
232, 236
               

               
Conread position:
               
27-521
               

               
Cow position:
               
chr18:14454031-14453539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
27-540
               

               
Cow position:
               
chr18:42724515-42724002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
228, 210
               

               
Conread position:
               
27-545
               

               
Cow position:
               
chr18:42791541-42792059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 149
               

               
Conread position:
               
27-553
               

               
Cow position:
               
chr18:52447097-52447624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
102, 93
               

               
Conread position:
               
27-553
               

               
Cow position:
               
chr18:52447265-52447792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
27-554
               

               
Cow position:
               
chr18:56316122-56316650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 297
               

               
Conread position:
               
27-561
               

               
Cow position:
               
chr18:40086357-40085833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
200, 141
               

               
Conread position:
               
27-561
               

               
Cow position:
               
chr18:41948939-41948405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 230
               

               
Conread position:
               
27-561
               

               
Cow position:
               
chr18:52428126-52428660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-561
               

               
Cow position:
               
chr18:52428378-52428912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 222
               

               
Conread position:
               
27-561
               

               
Cow position:
               
chr18:52433139-52433673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
234, 222
               

               
Conread position:
               
27-561
               

               
Cow position:
               
chr18:52433559-52434093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 222
               

               
Conread position:
               
27-562
               

               
Cow position:
               
chr18:53559915-53560450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 154
               

               
Conread position:
               
27-568
               

               
Cow position:
               
chr18:50848828-50849368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 236
               

               
Conread position:
               
28-296
               

               
Cow position:
               
chr18:50100057-50100326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
28-378
               

               
Cow position:
               
chr18:44154041-44153698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
262, 61
               

               
Conread position:
               
28-415
               

               
Cow position:
               
chr18:50048729-50048342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
263, 272
               

               
Conread position:
               
28-457
               

               
Cow position:
               
chr18:44253158-44252740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
28-492
               

               
Cow position:
               
chr18:50251076-50251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 70
               

               
Conread position:
               
28-493
               

               
Cow position:
               
chr18:50246067-50246532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
152, 138
               

               
Conread position:
               
28-493
               

               
Cow position:
               
chr18:50295430-50295894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 275
               

               
Conread position:
               
28-529
               

               
Cow position:
               
chr18:50848577-50849078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 148
               

               
Conread position:
               
28-540
               

               
Cow position:
               
chr18:33064780-33064268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 272
               

               
Conread position:
               
28-540
               

               
Cow position:
               
chr18:42744727-42744215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 148
               

               
Conread position:
               
28-542
               

               
Cow position:
               
chr18:43022829-43022315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
152, 148
               

               
Conread position:
               
28-542
               

               
Cow position:
               
chr18:43094004-43093502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
263, 271
               

               
Conread position:
               
28-542
               

               
Cow position:
               
chr18:44154464-44153948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 232
               

               
Conread position:
               
28-548
               

               
Cow position:
               
chr18:42791290-42791810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
156, 148
               

               
Conread position:
               
28-549
               

               
Cow position:
               
chr18:42792046-42792568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 148
               

               
Conread position:
               
28-553
               

               
Cow position:
               
chr18:51839403-51838877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
390, 398
               

               
Conread position:
               
28-553
               

               
Cow position:
               
chr18:52447014-52447540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
28-561
               

               
Cow position:
               
chr18:44184728-44184195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 272
               

               
Conread position:
               
28-561
               

               
Cow position:
               
chr18:51839487-51838954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
261, 268
               

               
Conread position:
               
28-561
               

               
Cow position:
               
chr18:52427791-52428324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
235, 221
               

               
Conread position:
               
28-562
               

               
Cow position:
               
chr18:50059633-50059099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
262, 271
               

               
Conread position:
               
28-568
               

               
Cow position:
               
chr18:42744559-42744019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 231
               

               
Conread position:
               
29-510
               

               
Cow position:
               
chr18:43093511-43093030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 278
               

               
Conread position:
               
29-541
               

               
Cow position:
               
chr18:51400691-51401203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 270
               

               
Conread position:
               
29-549
               

               
Cow position:
               
chr18:53610308-53609787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
147, 151
               

               
Conread position:
               
29-561
               

               
Cow position:
               
chr18:33064527-33063995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 270
               

               
Conread position:
               
29-562
               

               
Cow position:
               
chr18:56128448-56128981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
29-568
               

               
Cow position:
               
chr18:56248245-56247703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
30-495
               

               
Cow position:
               
chr18:42791040-42791505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
30-540
               

               
Cow position:
               
chr18:50281750-50282260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
30-542
               

               
Cow position:
               
chr18:44240253-44240765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
30-542
               

               
Cow position:
               
chr18:51874055-51874560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
159, 104
               

               
Conread position:
               
30-545
               

               
Cow position:
               
chr18:50083610-50084125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 269
               

               
Conread position:
               
30-553
               

               
Cow position:
               
chr18:50848159-50848683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
136, 169
               

               
Conread position:
               
30-554
               

               
Cow position:
               
chr18:40306329-40306854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 314
               

               
Conread position:
               
30-554
               

               
Cow position:
               
chr18:44253899-44253374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
155, 146
               

               
Conread position:
               
30-554
               

               
Cow position:
               
chr18:54992560-54993084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
30-561
               

               
Cow position:
               
chr18:43022575-43022044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
30-561
               

               
Cow position:
               
chr18:53509230-53509761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 323
               

               
Conread position:
               
30-561
               

               
Cow position:
               
chr18:53525684-53526215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 323
               

               
Conread position:
               
30-562
               

               
Cow position:
               
chr18:54967531-54968058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 162
               

               
Conread position:
               
30-562
               

               
Cow position:
               
chr18:54980056-54980586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 266
               

               
Conread position:
               
30-562
               

               
Cow position:
               
chr18:54993400-54993930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 266
               

               
Conread position:
               
31-497
               

               
Cow position:
               
chr18:50246322-50246789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 135
               

               
Conread position:
               
31-545
               

               
Cow position:
               
chr18:14453859-14453345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
131, 127
               

               
Conread position:
               
31-545
               

               
Cow position:
               
chr18:50250835-50251338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
31-555
               

               
Cow position:
               
chr18:55523301-55523825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 265
               

               
Conread position:
               
31-558
               

               
Cow position:
               
chr18:14453295-14452766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
31-559
               

               
Cow position:
               
chr18:53497965-53498494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 44
               

               
Conread position:
               
31-562
               

               
Cow position:
               
chr18:50848328-50848859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
32-486
               

               
Cow position:
               
chr18:42693802-42693348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
32-492
               

               
Cow position:
               
chr18:51839315-51838855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
32-495
               

               
Cow position:
               
chr18:50271707-50272169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 148
               

               
Conread position:
               
32-553
               

               
Cow position:
               
chr18:51752340-51751819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
32-553
               

               
Cow position:
               
chr18:56128535-56129057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
32-561
               

               
Cow position:
               
chr18:51400526-51401055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
32-561
               

               
Cow position:
               
chr18:51813057-51812529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
32-562
               

               
Cow position:
               
chr18:40086858-40086326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
32-562
               

               
Cow position:
               
chr18:53498131-53498664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
32-562
               

               
Cow position:
               
chr18:53635630-53635100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 144
               

               
Conread position:
               
32-568
               

               
Cow position:
               
chr18:55067116-55066580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 260
               

               
Conread position:
               
33-551
               

               
Cow position:
               
chr18:33064943-33064425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
33-555
               

               
Cow position:
               
chr18:56493839-56494361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 165
               

               
Conread position:
               
34-561
               

               
Cow position:
               
chr18:33065110-33064583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
34-562
               

               
Cow position:
               
chr18:50245989-50246517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
35-561
               

               
Cow position:
               
chr18:43175359-43174833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
36-554
               

               
Cow position:
               
chr18:56316047-56316566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 117
               

               
Conread position:
               
36-568
               

               
Cow position:
               
chr18:42675491-42674959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-477
               

               
Cow position:
               
chr18:43094160-43093723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
255, 60
               

               
Conread position:
               
37-561
               

               
Cow position:
               
chr18:40324966-40324445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
255, 87
               

               
Conread position:
               
37-562
               

               
Cow position:
               
chr18:54979559-54980084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 132
               

               
Conread position:
               
38-539
               

               
Cow position:
               
chr18:50031066-50030563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
38-542
               

               
Cow position:
               
chr18:51400280-51400784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
143, 138
               

               
Conread position:
               
38-554
               

               
Cow position:
               
chr18:51838786-51838274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 131
               

               
Conread position:
               
40-562
               

               
Cow position:
               
chr18:50271463-50271985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
223, 206
               

               
Conread position:
               
40-562
               

               
Cow position:
               
chr18:56330185-56329663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 214
               

               
Conread position:
               
42-562
               

               
Cow position:
               
chr18:49033378-49032858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
42-562
               

               
Cow position:
               
chr18:50281678-50282198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
43-540
               

               
Cow position:
               
chr18:49022233-49022728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
43-562
               

               
Cow position:
               
chr18:56433892-56434401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
47-497
               

               
Cow position:
               
chr18:41197501-41197950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 5
               

               
Conread position:
               
47-562
               

               
Cow position:
               
chr18:1417927-1418442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 174
               

               
Conread position:
               
48-385
               

               
Cow position:
               
chr18:40251102-40251429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
50-492
               

               
Cow position:
               
chr18:40306181-40306623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
50-537
               

               
Cow position:
               
chr18:40324872-40324385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 250
               

               
Conread position:
               
50-542
               

               
Cow position:
               
chr18:43120395-43119903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
50-555
               

               
Cow position:
               
chr18:49021498-49022000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
123, 74
               

               
Conread position:
               
51-549
               

               
Cow position:
               
chr18:50295201-50295700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 116
               

               
Conread position:
               
51-562
               

               
Cow position:
               
chr18:51752403-51751895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
52-396
               

               
Cow position:
               
chr18:51839127-51838783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
128, 124
               

               
Conread position:
               
52-493
               

               
Cow position:
               
chr18:50245671-50246112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
52-545
               

               
Cow position:
               
chr18:50098905-50099398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
52-548
               

               
Cow position:
               
chr18:51765984-51765488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
106, 116
               

               
Conread position:
               
53-561
               

               
Cow position:
               
chr18:43175593-43175085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
360, 373
               

               
Conread position:
               
53-562
               

               
Cow position:
               
chr18:53636113-53635604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
206, 210
               

               
Conread position:
               
53-562
               

               
Cow position:
               
chr18:56128052-56128561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
54-540
               

               
Cow position:
               
chr18:1417850-1418336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
61-540
               

               
Cow position:
               
chr18:50083305-50083784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
202, 198
               

               
Conread position:
               
61-540
               

               
Cow position:
               
chr18:50295379-50295858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
122, 117
               

               
Conread position:
               
62-360
               

               
Cow position:
               
chr18:55075112-55075411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
168, 228
               

               
Conread position:
               
63-545
               

               
Cow position:
               
chr18:43167733-43168215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 117
               

               
Conread position:
               
65-558
               

               
Cow position:
               
chr18:53571838-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
111, 116
               

               
Conread position:
               
65-561
               

               
Cow position:
               
chr18:53559701-53560197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-568
               

               
Cow position:
               
chr18:53587140-53586637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
72-542
               

               
Cow position:
               
chr18:50281624-50282094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
75-542
               

               
Cow position:
               
chr18:42960346-42959879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
77-492
               

               
Cow position:
               
chr18:51367640-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
112, 89
               

               
Conread position:
               
77-545
               

               
Cow position:
               
chr18:50059668-50059200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
86-562
               

               
Cow position:
               
chr18:54979353-54979832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
92-562
               

               
Cow position:
               
chr18:54979446-54979916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 204
               

               
Conread position:
               
93-555
               

               
Cow position:
               
chr18:49022617-49023079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
95-561
               

               
Cow position:
               
chr18:42837963-42837497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
89, 81
               

               
Conread position:
               
95-561
               

               
Cow position:
               
chr18:44184913-44184447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
75, 85
               

               
Conread position:
               
97-569
               

               
Cow position:
               
chr18:22634533-22635003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
99-562
               

               
Cow position:
               
chr18:40074916-40075379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-561
               

               
Cow position:
               
chr18:42985582-42985121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 157
               

               
Conread position:
               
103-497
               

               
Cow position:
               
chr18:44253335-44252942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 77
               

               
Conread position:
               
104-540
               

               
Cow position:
               
chr18:55497640-55497204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
414, 420
               

               
Conread position:
               
104-544
               

               
Cow position:
               
chr18:51874045-51874478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
305, 114
               

               
Conread position:
               
105-555
               

               
Cow position:
               
chr18:56433368-56433813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
107-501
               

               
Cow position:
               
chr18:14454035-14453641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
105, 114
               

               
Conread position:
               
107-561
               

               
Cow position:
               
chr18:43023086-43022632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
107-561
               

               
Cow position:
               
chr18:44154469-44154012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
109-531
               

               
Cow position:
               
chr18:43048741-43048319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
125, 121
               

               
Conread position:
               
110-562
               

               
Cow position:
               
chr18:44239745-44240197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
110-562
               

               
Cow position:
               
chr18:53509225-53509678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 402
               

               
Conread position:
               
110-562
               

               
Cow position:
               
chr18:53525679-53526132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 415
               

               
Conread position:
               
111-539
               

               
Cow position:
               
chr18:56267555-56267127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
114-562
               

               
Cow position:
               
chr18:42744725-42744277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 145
               

               
Conread position:
               
114-562
               

               
Cow position:
               
chr18:54979300-54979748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
114-562
               

               
Cow position:
               
chr18:54992560-54993008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr18:40251559-40251808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
160, 75
               

               
Conread position:
               
120-562
               

               
Cow position:
               
chr18:53571809-53572238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
171, 176
               

               
Conread position:
               
120-568
               

               
Cow position:
               
chr18:53559672-53560120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 176
               

               
Conread position:
               
123-565
               

               
Cow position:
               
chr18:53636128-53635685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
15, 185
               

               
Conread position:
               
123-565
               

               
Cow position:
               
chr18:56128037-56128480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
128-562
               

               
Cow position:
               
chr18:53587160-53586727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
131-561
               

               
Cow position:
               
chr18:41197501-41197930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
131-562
               

               
Cow position:
               
chr18:50083291-50083722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
158, 168
               

               
Conread position:
               
134-542
               

               
Cow position:
               
chr18:55497694-55497286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
134-562
               

               
Cow position:
               
chr18:40306181-40306609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr18:1417855-1418273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
105, 110
               

               
Conread position:
               
149-416
               

               
Cow position:
               
chr18:55075115-55075383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
149-562
               

               
Cow position:
               
chr18:42790907-42791320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
149-562
               

               
Cow position:
               
chr18:42827431-42827844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 193
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr18:43053428-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
154-551
               

               
Cow position:
               
chr18:56433333-56433725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
154-569
               

               
Cow position:
               
chr18:54966815-54967230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
137, 142
               

               
Conread position:
               
155-478
               

               
Cow position:
               
chr18:50059674-50059351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
155-540
               

               
Cow position:
               
chr18:50271410-50271795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 88
               

               
Conread position:
               
155-562
               

               
Cow position:
               
chr18:50848119-50848523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
167-562
               

               
Cow position:
               
chr18:55008354-55008747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
169-561
               

               
Cow position:
               
chr18:52427511-52427904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 167
               

               
Conread position:
               
179-561
               

               
Cow position:
               
chr18:42985587-42985205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
114, 121
               

               
Conread position:
               
182-501
               

               
Cow position:
               
chr18:14454043-14453725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
183-568
               

               
Cow position:
               
chr18:44398462-44398077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
186-545
               

               
Cow position:
               
chr18:50059727-50059368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
188-561
               

               
Cow position:
               
chr18:51874045-51874411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
193-560
               

               
Cow position:
               
chr18:43048741-43048374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
314, 308
               

               
Conread position:
               
194-561
               

               
Cow position:
               
chr18:33093118-33092751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
203-562
               

               
Cow position:
               
chr18:56493841-56494200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 149
               

               
Conread position:
               
211-561
               

               
Cow position:
               
chr18:41197496-41197846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
212-545
               

               
Cow position:
               
chr18:50083288-50083621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
212-551
               

               
Cow position:
               
chr18:40306175-40306514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 88
               

               
Conread position:
               
224-559
               

               
Cow position:
               
chr18:53555187-53554853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
230-497
               

               
Cow position:
               
chr18:55075112-55075381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
265-562
               

               
Cow position:
               
chr18:44398464-44398167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
268-555
               

               
Cow position:
               
chr18:14454042-14453755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
227, 237
               

               
Conread position:
               
269-562
               

               
Cow position:
               
chr18:49033403-49033110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-561
               

               
Cow position:
               
chr18:43048741-43048457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
283-562
               

               
Cow position:
               
chr18:53497965-53498241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
314-573
               

               
Cow position:
               
chr18:55075112-55075372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
869-1116
               

               
Cow position:
               
chr18:55065899-55065655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 45
               
Show alignments to all cow chromosomes.