Cow genome map
Conread name: | Ss1.1-reje28b_k1.5 |
Conread position: | 3-561 |
Cow position: | chr19:23614488-23615047 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 261 |
Conread position: | 6-559 |
Cow position: | chr19:14959350-14958811 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 350 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 14, 52 |
Conread position: | 7-288 |
Cow position: | chr19:23650195-23650476 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 187 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 254, 247 |
Conread position: | 8-349 |
Cow position: | chr19:14948329-14947989 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 216 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 291, 282 |
Conread position: | 8-459 |
Cow position: | chr19:23650028-23650479 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 288 |
Conread position: | 8-551 |
Cow position: | chr19:23614410-23614953 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 168 |
Conread position: | 8-562 |
Cow position: | chr19:14960087-14959549 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 350 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 156, 147 |
Conread position: | 9-251 |
Cow position: | chr19:14940799-14941041 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 158 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-296 |
Cow position: | chr19:23614831-23615117 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 192 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 174, 159 |
Conread position: | 9-303 |
Cow position: | chr19:43570001-43569708 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 203 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 247, 254 |
Conread position: | 9-364 |
Cow position: | chr19:23614747-23615102 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 233 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 150, 163 |
Conread position: | 9-377 |
Cow position: | chr19:23650113-23650481 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 240 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 253, 249 |
Conread position: | 9-380 |
Cow position: | chr19:20678342-20678713 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 237 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 167, 171 |
Conread position: | 9-483 |
Cow position: | chr19:20635494-20635020 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 302 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 192, 188 |
Conread position: | 9-539 |
Cow position: | chr19:23597168-23597698 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 254 |
Conread position: | 9-542 |
Cow position: | chr19:23649609-23650142 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 167 |
Conread position: | 9-548 |
Cow position: | chr19:14939960-14940498 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 29 |
Conread position: | 9-549 |
Cow position: | chr19:23649861-23650402 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 254 |
Conread position: | 9-559 |
Cow position: | chr19:14959834-14959300 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 339 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 124, 22 |
Conread position: | 9-561 |
Cow position: | chr19:20677838-20678390 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 170 |
Conread position: | 9-561 |
Cow position: | chr19:23649777-23650329 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 22 |
Conread position: | 9-563 |
Cow position: | chr19:14959514-14958975 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 349 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 278, 206 |
Conread position: | 10-492 |
Cow position: | chr19:20678259-20678738 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 310 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 80, 72 |
Conread position: | 10-542 |
Cow position: | chr19:23597085-23597617 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 286 |
Conread position: | 10-545 |
Cow position: | chr19:14940296-14940831 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 289 |
Conread position: | 10-561 |
Cow position: | chr19:20635577-20635026 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 290 |
Conread position: | 10-561 |
Cow position: | chr19:20677671-20678222 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 167 |
Conread position: | 10-561 |
Cow position: | chr19:23613656-23614207 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 234 |
Conread position: | 11-212 |
Cow position: | chr19:23614917-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 135 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-374 |
Cow position: | chr19:23597338-23597701 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 230 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 280, 297 |
Conread position: | 11-387 |
Cow position: | chr19:43570083-43569708 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 249 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 83, 76 |
Conread position: | 11-420 |
Cow position: | chr19:14916020-14916425 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 249 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 280, 109 |
Conread position: | 11-516 |
Cow position: | chr19:23614581-23615086 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 319 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 178, 164 |
Conread position: | 11-540 |
Cow position: | chr19:23649947-23650476 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 288 |
Conread position: | 11-545 |
Cow position: | chr19:23596921-23597452 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 319 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 252, 115 |
Conread position: | 11-559 |
Cow position: | chr19:14940549-14941096 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 288 |
Conread position: | 11-561 |
Cow position: | chr19:14940045-14940595 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 165 |
Conread position: | 11-561 |
Cow position: | chr19:14940381-14940931 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 288 |
Conread position: | 11-561 |
Cow position: | chr19:23613489-23614039 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 76 |
Conread position: | 11-565 |
Cow position: | chr19:14940213-14940767 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 165 |
Conread position: | 12-540 |
Cow position: | chr19:43570166-43569642 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 158 |
Conread position: | 12-545 |
Cow position: | chr19:23614076-23614611 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 253 |
Conread position: | 15-561 |
Cow position: | chr19:20677760-20678306 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 74 |
Conread position: | 17-545 |
Cow position: | chr19:43570245-43569719 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 60 |
Conread position: | 17-557 |
Cow position: | chr19:23613411-23613953 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 237 |
Conread position: | 18-562 |
Cow position: | chr19:20677511-20678055 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 331 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 273, 281 |
Conread position: | 19-492 |
Cow position: | chr19:23613581-23614054 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 280 |
Conread position: | 19-542 |
Cow position: | chr19:14940137-14940660 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 244 |
Conread position: | 19-561 |
Cow position: | chr19:20677594-20678138 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 335 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 12, 279 |
Conread position: | 19-561 |
Cow position: | chr19:23614001-23614543 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 484, 491 |
Conread position: | 20-492 |
Cow position: | chr19:23614170-23614642 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 67 |
Conread position: | 20-496 |
Cow position: | chr19:14948484-14948008 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 84 |
Conread position: | 20-545 |
Cow position: | chr19:20635735-20635210 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 325 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 20, 34 |
Conread position: | 20-561 |
Cow position: | chr19:20678017-20678558 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 340 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 163, 179 |
Conread position: | 20-562 |
Cow position: | chr19:14940474-14941016 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 156 |
Conread position: | 20-562 |
Cow position: | chr19:23649284-23649826 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 279 |
Conread position: | 20-562 |
Cow position: | chr19:23649704-23650246 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 289 |
Conread position: | 21-416 |
Cow position: | chr19:14960158-14959765 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 259 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 242, 238 |
Conread position: | 24-460 |
Cow position: | chr19:14959256-14958826 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 286 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 65, 51 |
Conread position: | 24-464 |
Cow position: | chr19:23614678-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 283 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 165, 144 |
Conread position: | 25-548 |
Cow position: | chr19:43570395-43569882 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 117 |
Conread position: | 26-495 |
Cow position: | chr19:14960235-14959770 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 82 |
Conread position: | 26-501 |
Cow position: | chr19:20635645-20635170 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 293 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 267, 280 |
Conread position: | 26-516 |
Cow position: | chr19:23614344-23614834 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 52 |
Conread position: | 26-540 |
Cow position: | chr19:20677939-20678451 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 266 |
Conread position: | 26-542 |
Cow position: | chr19:23613924-23614440 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 264, 273 |
Conread position: | 26-548 |
Cow position: | chr19:20678191-20678713 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 150 |
Conread position: | 26-549 |
Cow position: | chr19:23649458-23649982 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 151 |
Conread position: | 26-562 |
Cow position: | chr19:14959901-14959381 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 334 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 40, 26 |
Conread position: | 26-591 |
Cow position: | chr19:14960319-14959760 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 170 |
Conread position: | 27-545 |
Cow position: | chr19:23614261-23614779 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 325 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 153, 139 |
Conread position: | 28-497 |
Cow position: | chr19:20678109-20678578 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 293 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 226, 218 |
Conread position: | 28-547 |
Cow position: | chr19:23613758-23614276 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 466, 479 |
Conread position: | 28-553 |
Cow position: | chr19:14960401-14959876 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 248 |
Conread position: | 31-497 |
Cow position: | chr19:14915955-14916418 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 294 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 41, 20 |
Conread position: | 32-545 |
Cow position: | chr19:23613846-23614359 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 264 |
Conread position: | 39-568 |
Cow position: | chr19:14960472-14959947 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 40-561 |
Cow position: | chr19:23649388-23649909 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 137 |
Conread position: | 40-562 |
Cow position: | chr19:23613350-23613872 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 197 |
Conread position: | 42-562 |
Cow position: | chr19:23596868-23597385 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 136 |
Conread position: | 51-561 |
Cow position: | chr19:43570452-43569953 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 319 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 29, 55 |
Conread position: | 61-462 |
Cow position: | chr19:14959712-14959313 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 255 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 119, 61 |
Conread position: | 70-562 |
Cow position: | chr19:23596813-23597301 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 306 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 269, 13 |
Conread position: | 93-562 |
Cow position: | chr19:14939960-14940428 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 20 |
Conread position: | 101-562 |
Cow position: | chr19:23649281-23649742 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 276 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 189, 198 |
Conread position: | 117-545 |
Cow position: | chr19:23613343-23613771 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 269 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 174, 179 |
Conread position: | 135-537 |
Cow position: | chr19:14948453-14948052 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 258 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 157, 41 |
Conread position: | 224-554 |
Cow position: | chr19:14948448-14948118 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 214 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 39, 35 |
Show alignments to all cow chromosomes.