Cow genome map


           Conread name:
           Ss1.1-reje28b_k1.5
        

               Conread position:
               2-562
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               352
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               92, 73
               

               Conread position:
               3-553
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               336
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               7, 219
               

               Conread position:
               8-562
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               328
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               9-291
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               179, 169
               

               Conread position:
               9-545
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               479, 491
               

               Conread position:
               9-551
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 338
               

               Conread position:
               9-561
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 66
               

               Conread position:
               9-562
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               480, 491
               

               Conread position:
               10-530
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               320
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               179, 175
               

               Conread position:
               10-554
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               325
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 291
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               329
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 76
               

               Conread position:
               11-542
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 165
               

               Conread position:
               14-540
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               83, 69
               

               Conread position:
               17-562
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 242
               

               Conread position:
               20-492
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               168, 158
               

               Conread position:
               20-538
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-549
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               159, 140
               

               Conread position:
               26-493
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               150, 172
               

               Conread position:
               26-497
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               464, 95
               

               Conread position:
               26-542
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               26-553
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 223
               

               Conread position:
               27-537
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               319
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               28-521
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               306
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               148, 106
               

               Conread position:
               28-539
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               28-540
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 235
               

               Conread position:
               32-569
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               323
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               144, 19
               

               Conread position:
               42-489
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               295, 303
               

               Conread position:
               47-552
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               304
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               250, 121
               

               Conread position:
               51-561
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               318
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               212, 200
               

               Conread position:
               103-545
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               281
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               72, 77
               

               Conread position:
               130-491
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               265, 270
               

               Conread position:
               209-548
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               51, 43
               
Show alignments to all cow chromosomes.