Cow genome map

Conread name: Ss1.1-reje28b_k1.5

Conread position: 1-489
Cow position:
Alignm length: 495
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 76

Conread position: 2-279
Cow position:
Alignm length: 280
Alignm identity: 181
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 220

Conread position: 2-548
Cow position:
Alignm length: 551
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 86

Conread position: 2-561
Cow position:
Alignm length: 569
Alignm identity: 358
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 6

Conread position: 2-561
Cow position:
Alignm length: 565
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 5-422
Cow position:
Alignm length: 423
Alignm identity: 271
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 305

Conread position: 7-567
Cow position:
Alignm length: 567
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 79

Conread position: 8-201
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 73

Conread position: 8-361
Cow position:
Alignm length: 354
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 8-484
Cow position:
Alignm length: 481
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 213

Conread position: 9-290
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 158, 166

Conread position: 9-335
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 253, 243

Conread position: 9-364
Cow position:
Alignm length: 357
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 86

Conread position: 9-416
Cow position:
Alignm length: 408
Alignm identity: 258
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 9-493
Cow position:
Alignm length: 485
Alignm identity: 294
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-369
Cow position:
Alignm length: 361
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 251, 241

Conread position: 10-370
Cow position:
Alignm length: 361
Alignm identity: 235
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 10-561
Cow position:
Alignm length: 555
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 75

Conread position: 11-561
Cow position:
Alignm length: 555
Alignm identity: 342
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 37

Conread position: 11-561
Cow position:
Alignm length: 555
Alignm identity: 343
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 351, 356

Conread position: 17-530
Cow position:
Alignm length: 516
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 237

Conread position: 17-542
Cow position:
Alignm length: 529
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 282

Conread position: 17-562
Cow position:
Alignm length: 552
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 68

Conread position: 19-380
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 157

Conread position: 23-444
Cow position:
Alignm length: 423
Alignm identity: 262
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 60, 52

Conread position: 26-285
Cow position:
Alignm length: 260
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 26-416
Cow position:
Alignm length: 395
Alignm identity: 241
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 98

Conread position: 26-498
Cow position:
Alignm length: 474
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 283

Conread position: 26-545
Cow position:
Alignm length: 523
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 150

Conread position: 26-545
Cow position:
Alignm length: 522
Alignm identity: 320
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 264, 273

Conread position: 26-561
Cow position:
Alignm length: 537
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 231

Conread position: 27-542
Cow position:
Alignm length: 518
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 227

Conread position: 28-542
Cow position:
Alignm length: 517
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 229

Conread position: 28-561
Cow position:
Alignm length: 537
Alignm identity: 330
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 137, 151

Conread position: 34-561
Cow position:
Alignm length: 530
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 391

Conread position: 36-548
Cow position:
Alignm length: 517
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 54

Conread position: 41-549
Cow position:
Alignm length: 515
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 135

Conread position: 42-372
Cow position:
Alignm length: 333
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 7

Conread position: 50-561
Cow position:
Alignm length: 515
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 209

Conread position: 52-562
Cow position:
Alignm length: 513
Alignm identity: 305
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 238, 247

Conread position: 53-542
Cow position:
Alignm length: 492
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 201

Conread position: 56-540
Cow position:
Alignm length: 487
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 203

Conread position: 87-539
Cow position:
Alignm length: 454
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 26

Conread position: 100-548
Cow position:
Alignm length: 453
Alignm identity: 280
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 64, 71

Conread position: 134-456
Cow position:
Alignm length: 324
Alignm identity: 198
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 129

Conread position: 135-561
Cow position:
Alignm length: 428
Alignm identity: 272
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 283, 292

Conread position: 137-548
Cow position:
Alignm length: 414
Alignm identity: 258
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 274, 285

Conread position: 140-530
Cow position:
Alignm length: 394
Alignm identity: 246
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 15

Conread position: 179-562
Cow position:
Alignm length: 387
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 208-561
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 84, 98

Conread position: 223-553
Cow position:
Alignm length: 333
Alignm identity: 214
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 195, 199

Conread position: 229-544
Cow position:
Alignm length: 317
Alignm identity: 204
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 80

Show alignments to all cow chromosomes.