Cow genome map

Conread name: Ss1.1-reje28b_k1.5

Conread position: 4-358
Cow position: chr3:68027392-68027745 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 75, 6

Conread position: 4-386
Cow position: chr3:68045985-68046364 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 249
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 168, 6

Conread position: 7-530
Cow position: chr3:77351107-77350594 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 329
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 121, 69

Conread position: 8-338
Cow position: chr3:62743143-62743473 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 212
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 172, 158

Conread position: 8-462
Cow position: chr3:62722022-62721568 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 298

Conread position: 9-541
Cow position: chr3:62722105-62721573 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 290

Conread position: 9-545
Cow position: chr3:62742498-62743025 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 143

Conread position: 9-551
Cow position: chr3:62742914-62743435 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 346
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 254, 66

Conread position: 9-554
Cow position: chr3:62722189-62721643 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 9-562
Cow position: chr3:68045653-68046206 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 77

Conread position: 9-567
Cow position: chr3:68027060-68027618 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 290

Conread position: 10-535
Cow position: chr3:62742415-62742937 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 77

Conread position: 10-561
Cow position: chr3:68027145-68027696 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 336
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 253, 247

Conread position: 10-561
Cow position: chr3:68045738-68046289 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 169

Conread position: 11-482
Cow position: chr3:68027314-68027784 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 295
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 76

Conread position: 11-539
Cow position: chr3:68045823-68046351 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 162

Conread position: 12-561
Cow position: chr3:68027231-68027779 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 69

Conread position: 16-464
Cow position: chr3:68045912-68046358 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 281
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 70

Conread position: 17-486
Cow position: chr3:62743073-62743534 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 293
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 231, 43

Conread position: 20-551
Cow position: chr3:62722262-62721731 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 156

Conread position: 20-561
Cow position: chr3:62742342-62742877 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 339
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 156, 12

Conread position: 20-562
Cow position: chr3:62722346-62721804 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 8

Conread position: 25-561
Cow position: chr3:68045585-68046121 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 324
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 266, 284

Conread position: 28-497
Cow position: chr3:77351169-77350708 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 302
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 161, 64

Conread position: 31-561
Cow position: chr3:62742269-62742793 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 330
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 231, 83

Conread position: 54-549
Cow position: chr3:68027021-68027516 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 298
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 61-501
Cow position: chr3:62743033-62743468 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 267
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 230, 84

Conread position: 63-562
Cow position: chr3:62722387-62721888 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 53

Conread position: 98-562
Cow position: chr3:62742252-62742712 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 289
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 77

Show alignments to all cow chromosomes.