Cow genome map
| Conread name: | Ss1.1-reje28b_k1.5 |
| Conread position: | 6-561 |
| Cow position: | chr6:49340705-49341260 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 147 |
| Conread position: | 8-492 |
| Cow position: | chr6:49396260-49396744 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 248, 261 |
| Conread position: | 8-557 |
| Cow position: | chr6:49428951-49429500 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 176, 168 |
| Conread position: | 10-246 |
| Cow position: | chr6:49341213-49341448 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 10-561 |
| Cow position: | chr6:49340373-49340924 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 289 |
| Conread position: | 19-421 |
| Cow position: | chr6:49341054-49341455 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 244, 232 |
| Conread position: | 19-554 |
| Cow position: | chr6:49428542-49429078 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 19-562 |
| Cow position: | chr6:49340634-49341177 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 277 |
| Conread position: | 20-502 |
| Cow position: | chr6:49340971-49341452 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 279 |
| Conread position: | 20-545 |
| Cow position: | chr6:49340887-49341412 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-545 |
| Cow position: | chr6:49340807-49341328 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 272 |
| Conread position: | 24-561 |
| Cow position: | chr6:49340555-49341092 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 129 |
| Conread position: | 26-561 |
| Cow position: | chr6:49340473-49341008 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 273 |
| Conread position: | 28-561 |
| Cow position: | chr6:49396202-49396729 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 325 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 233, 29 |
| Conread position: | 32-542 |
| Cow position: | chr6:49396452-49396962 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 178, 202 |
| Conread position: | 56-540 |
| Cow position: | chr6:49428243-49428727 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 109-568 |
| Cow position: | chr6:49340388-49340847 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 190 |
| Conread position: | 179-568 |
| Cow position: | chr6:49340374-49340763 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 249 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-567 |
| Cow position: | chr6:49340372-49340678 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 32, 45 |
Show alignments to all cow chromosomes.