Cow genome map
| Conread name: | Ss1.1-reje28b_k1.5 |
| Conread position: | 2-545 |
| Cow position: | chrX:29045216-29044672 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 258 |
| Conread position: | 2-561 |
| Cow position: | chrX:29045698-29045160 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 349 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 409, 287 |
| Conread position: | 3-388 |
| Cow position: | chrX:29045047-29044660 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 297 |
| Conread position: | 3-486 |
| Cow position: | chrX:25310103-25310586 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 297 |
| Conread position: | 7-492 |
| Cow position: | chrX:13826730-13826245 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 176, 171 |
| Conread position: | 7-492 |
| Cow position: | chrX:13826898-13826413 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 73, 77 |
| Conread position: | 8-540 |
| Cow position: | chrX:25309773-25310305 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 82 |
| Conread position: | 10-402 |
| Cow position: | chrX:25310195-25310586 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 261 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 253, 248 |
| Conread position: | 15-548 |
| Cow position: | chrX:25325781-25325248 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 62 |
| Conread position: | 18-562 |
| Cow position: | chrX:25325694-25325150 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 19-380 |
| Cow position: | chrX:25324601-25324240 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 171, 157 |
| Conread position: | 19-545 |
| Cow position: | chrX:25325105-25324579 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 240 |
| Conread position: | 19-548 |
| Cow position: | chrX:25325273-25324744 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 157 |
| Conread position: | 20-486 |
| Cow position: | chrX:25324684-25324220 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 243, 239 |
| Conread position: | 20-497 |
| Cow position: | chrX:25309701-25310179 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 20-562 |
| Cow position: | chrX:25324936-25324394 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 239 |
| Conread position: | 24-562 |
| Cow position: | chrX:25325352-25324814 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 153 |
| Conread position: | 24-562 |
| Cow position: | chrX:25325604-25325066 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 25-404 |
| Cow position: | chrX:29045759-29045380 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 265, 274 |
| Conread position: | 26-555 |
| Cow position: | chrX:25324762-25324233 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 283 |
| Conread position: | 26-561 |
| Cow position: | chrX:25310043-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 336 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 26-562 |
| Cow position: | chrX:25325182-25324646 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 283 |
| Conread position: | 26-562 |
| Cow position: | chrX:25325434-25324898 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 274 |
| Conread position: | 28-541 |
| Cow position: | chrX:25325012-25324499 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 148 |
| Conread position: | 28-549 |
| Cow position: | chrX:25325516-25324994 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 281 |
| Conread position: | 28-562 |
| Cow position: | chrX:29045273-29044739 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 148 |
| Conread position: | 31-495 |
| Cow position: | chrX:29045837-29045373 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 31-553 |
| Cow position: | chrX:25324841-25324318 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 145 |
| Conread position: | 56-554 |
| Cow position: | chrX:13826933-13826434 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 306 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 104, 112 |
| Conread position: | 60-562 |
| Cow position: | chrX:29045325-29044823 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 99-507 |
| Cow position: | chrX:25309696-25310105 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 191, 200 |
| Conread position: | 108-562 |
| Cow position: | chrX:25325856-25325402 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 138-561 |
| Cow position: | chrX:29045331-29044908 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 126, 121 |
| Conread position: | 145-561 |
| Cow position: | chrX:25309658-25310074 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 166-542 |
| Cow position: | chrX:25325882-25325506 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 224-562 |
| Cow position: | chrX:29045329-29044991 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 266-545 |
| Cow position: | chrX:29045769-29045491 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 154, 12 |
Show alignments to all cow chromosomes.