Cow genome map
| Conread name: | Ss1.1-reru03c_m20.5 |
| Conread position: | 25-647 |
| Cow position: | chr10:9031506-9032144 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 378 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 97, 505 |
| Conread position: | 40-152 |
| Cow position: | chr10:8996656-8996544 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-743 |
| Cow position: | chr10:8996605-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 138-784 |
| Cow position: | chr10:8996689-8996044 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 138-784 |
| Cow position: | chr10:8996773-8996128 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 152-483 |
| Cow position: | chr10:9031333-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 210 |
| Conread position: | 152-526 |
| Cow position: | chr10:9010236-9009862 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-514 |
| Cow position: | chr10:21938991-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 239, 0 |
| Conread position: | 153-779 |
| Cow position: | chr10:9010487-9009861 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 122 |
| Conread position: | 156-704 |
| Cow position: | chr10:9010400-9009852 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 121 |
| Conread position: | 157-779 |
| Cow position: | chr10:8996840-8996217 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 174-766 |
| Cow position: | chr10:21939222-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 179-775 |
| Cow position: | chr10:8996902-8996305 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 213-567 |
| Cow position: | chr10:9031310-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 213-784 |
| Cow position: | chr10:9010511-9009940 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 156 |
| Conread position: | 217-776 |
| Cow position: | chr10:9010591-9010032 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 218-651 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 302-735 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-779 |
| Cow position: | chr10:8996851-8996385 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-784 |
| Cow position: | chr10:8996934-8996464 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-782 |
| Cow position: | chr10:9031664-9032113 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 159, 344 |
| Conread position: | 342-788 |
| Cow position: | chr10:21939222-21938775 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 444, 0 |
| Conread position: | 386-766 |
| Cow position: | chr10:9031231-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 402-783 |
| Cow position: | chr10:9010574-9010193 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 64 |
| Conread position: | 426-781 |
| Cow position: | chr10:9031187-9031542 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 124 |
| Conread position: | 502-784 |
| Cow position: | chr10:9031664-9031957 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 551-784 |
| Cow position: | chr10:9031228-9031461 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 52, 67 |
Show alignments to all cow chromosomes.