Cow genome map
| Conread name: | Ss1.1-reru03c_m20.5 |
| Conread position: | 139-775 |
| Cow position: | chr2:78754823-78755457 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 17 |
| Conread position: | 139-779 |
| Cow position: | chr2:78755410-78756047 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 20 |
| Conread position: | 139-789 |
| Cow position: | chr2:78755577-78756225 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 17 |
| Conread position: | 144-775 |
| Cow position: | chr2:78755664-78756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 16 |
| Conread position: | 152-567 |
| Cow position: | chr2:82800033-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 152-744 |
| Cow position: | chr2:78755840-78756428 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 7 |
| Conread position: | 152-767 |
| Cow position: | chr2:5875011-5874396 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 152-784 |
| Cow position: | chr2:82799697-82800329 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 142 |
| Conread position: | 152-784 |
| Cow position: | chr2:82799781-82800413 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 149 |
| Conread position: | 152-787 |
| Cow position: | chr2:78754100-78754729 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 64 |
| Conread position: | 152-791 |
| Cow position: | chr2:78754182-78754815 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 9 |
| Conread position: | 153-735 |
| Cow position: | chr2:82799866-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 141 |
| Conread position: | 153-767 |
| Cow position: | chr2:5874842-5874228 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 367 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 145, 132 |
| Conread position: | 153-778 |
| Cow position: | chr2:78755004-78755627 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 215 |
| Conread position: | 153-779 |
| Cow position: | chr2:86465522-86466148 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 412 |
| Conread position: | 153-791 |
| Cow position: | chr2:78754434-78755055 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 8 |
| Conread position: | 156-740 |
| Cow position: | chr2:5874923-5874339 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 354 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 113, 128 |
| Conread position: | 156-778 |
| Cow position: | chr2:86465357-86465979 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 211 |
| Conread position: | 156-778 |
| Cow position: | chr2:86465441-86466063 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 211 |
| Conread position: | 156-784 |
| Cow position: | chr2:82799533-82800161 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 157-771 |
| Cow position: | chr2:86465610-86466222 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 367 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 128, 133 |
| Conread position: | 157-783 |
| Cow position: | chr2:78754687-78755298 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 34 |
| Conread position: | 160-778 |
| Cow position: | chr2:86465109-86465727 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 170-766 |
| Cow position: | chr2:5874741-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 355 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 171-625 |
| Cow position: | chr2:5874572-5874118 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 107, 119 |
| Conread position: | 171-783 |
| Cow position: | chr2:5875160-5874548 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 362 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 266, 274 |
| Conread position: | 174-778 |
| Cow position: | chr2:82799467-82800071 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 191 |
| Conread position: | 213-775 |
| Cow position: | chr2:86465078-86465640 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 229 |
| Conread position: | 218-789 |
| Cow position: | chr2:78754817-78755388 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 563, 520 |
| Conread position: | 231-783 |
| Cow position: | chr2:5875016-5874464 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 132, 139 |
| Conread position: | 234-784 |
| Cow position: | chr2:86465267-86465817 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 320 |
| Conread position: | 248-783 |
| Cow position: | chr2:82799457-82799992 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 188 |
| Conread position: | 287-776 |
| Cow position: | chr2:86465068-86465557 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-784 |
| Cow position: | chr2:48689541-48689075 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 52 |
| Conread position: | 328-785 |
| Cow position: | chr2:82799453-82799910 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-774 |
| Cow position: | chr2:86464994-86465387 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 487-783 |
| Cow position: | chr2:5875180-5874884 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 279, 292 |
Show alignments to all cow chromosomes.