Cow genome map


           Conread name:
           Ss1.1-reru03c_m20.5
        

               Conread position:
               152-660
               

               Cow position:
               chr21:34223049-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 137
               

               Conread position:
               153-730
               

               Cow position:
               chr21:12608506-12607929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               332
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               146, 113
               

               Conread position:
               153-774
               

               Cow position:
               chr21:12658836-12659458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               626
               

               Alignm identity:
               365
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               113, 137
               

               Conread position:
               153-778
               

               Cow position:
               chr21:12659256-12659881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               351
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               112, 130
               

               Conread position:
               165-784
               

               Cow position:
               chr21:12608914-12608295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               364
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               589, 584
               

               Conread position:
               171-782
               

               Cow position:
               chr21:12659106-12659717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               355
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               95, 119
               

               Conread position:
               185-792
               

               Cow position:
               chr21:12608558-12607951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               361
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               212-744
               

               Cow position:
               chr21:34223073-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 69
               

               Conread position:
               229-784
               

               Cow position:
               chr21:12658827-12659383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               334
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               6, 58
               

               Conread position:
               297-784
               

               Cow position:
               chr21:34223153-34222669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 74
               

               Conread position:
               314-784
               

               Cow position:
               chr21:34223055-34222585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               414-780
               

               Cow position:
               chr21:12608917-12608551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 31
               
Show alignments to all cow chromosomes.