Cow genome map
Conread name: | Ss1.1-reru03c_m20.5 |
Conread position: | 18-152 |
Cow position: | chr24:17070460-17070593 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 25-152 |
Cow position: | chr24:17077918-17077791 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 96 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 138-778 |
Cow position: | chr24:17035717-17035078 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 18 |
Conread position: | 138-782 |
Cow position: | chr24:17035885-17035242 (view UCSC Genome Browser custom track) |
Alignm length: | 646 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 18 |
Conread position: | 144-785 |
Cow position: | chr24:17070370-17071010 (view UCSC Genome Browser custom track) |
Alignm length: | 646 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 18 |
Conread position: | 152-344 |
Cow position: | chr24:17013334-17013525 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 169, 0 |
Conread position: | 152-576 |
Cow position: | chr24:17070629-17071053 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 40 |
Conread position: | 152-671 |
Cow position: | chr24:17035452-17034934 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 141 |
Conread position: | 152-777 |
Cow position: | chr24:17078259-17077634 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 152-792 |
Cow position: | chr24:17036292-17035652 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 114 |
Conread position: | 152-792 |
Cow position: | chr24:17036376-17035736 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 195 |
Conread position: | 153-614 |
Cow position: | chr24:17077922-17077462 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 42 |
Conread position: | 153-747 |
Cow position: | chr24:17070462-17071056 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 153-780 |
Cow position: | chr24:17036207-17035580 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 26 |
Conread position: | 153-782 |
Cow position: | chr24:17035619-17034990 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 544, 551 |
Conread position: | 153-783 |
Cow position: | chr24:17035955-17035325 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 520, 526 |
Conread position: | 153-784 |
Cow position: | chr24:17036039-17035408 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 153-784 |
Cow position: | chr24:17036123-17035492 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 292 |
Conread position: | 153-784 |
Cow position: | chr24:17036543-17035912 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 365, 353 |
Conread position: | 156-669 |
Cow position: | chr24:17070549-17071062 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 157-782 |
Cow position: | chr24:17078086-17077462 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 588, 0 |
Conread position: | 164-512 |
Cow position: | chr24:17013178-17013525 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 225 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 106, 125 |
Conread position: | 165-392 |
Cow position: | chr24:16986445-16986675 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 156 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 211, 0 |
Conread position: | 165-780 |
Cow position: | chr24:17035775-17035160 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 29 |
Conread position: | 171-783 |
Cow position: | chr24:17036606-17035997 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 19 |
Conread position: | 174-785 |
Cow position: | chr24:17078153-17077542 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 196 |
Conread position: | 179-755 |
Cow position: | chr24:17035508-17034934 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 10 |
Conread position: | 179-779 |
Cow position: | chr24:17036432-17035833 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 7 |
Conread position: | 217-792 |
Cow position: | chr24:17078278-17077703 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 153 |
Conread position: | 235-596 |
Cow position: | chr24:17013165-17013525 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 228 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 338, 0 |
Conread position: | 249-476 |
Cow position: | chr24:16986445-16986673 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 153 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 109, 116 |
Conread position: | 249-784 |
Cow position: | chr24:17036612-17036080 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 26 |
Conread position: | 302-660 |
Cow position: | chr24:17013148-17013506 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 167 |
Conread position: | 321-531 |
Cow position: | chr24:16986433-16986643 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 140 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 122, 127 |
Conread position: | 338-775 |
Cow position: | chr24:17013103-17013536 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 34 |
Conread position: | 423-627 |
Cow position: | chr24:16986451-16986655 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 119, 108 |
Conread position: | 470-784 |
Cow position: | chr24:17013148-17013462 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 214 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 501-704 |
Cow position: | chr24:16986445-16986648 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 119, 97 |
Conread position: | 553-783 |
Cow position: | chr24:17013147-17013377 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 159 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 582-792 |
Cow position: | chr24:17070387-17070597 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 16, 25 |
Show alignments to all cow chromosomes.