Cow genome map
| Conread name: | Ss1.1-reru03c_m20.5 |
| Conread position: | 19-776 |
| Cow position: | chr25:36800260-36801005 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 29-161 |
| Cow position: | chr25:33157462-33157331 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 132-733 |
| Cow position: | chr25:34433840-34434426 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 367 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 459, 24 |
| Conread position: | 137-764 |
| Cow position: | chr25:34732284-34731660 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 380 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 138-783 |
| Cow position: | chr25:33298972-33299616 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 18 |
| Conread position: | 138-784 |
| Cow position: | chr25:34447095-34447738 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 138-784 |
| Cow position: | chr25:34770051-34769406 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 18 |
| Conread position: | 139-638 |
| Cow position: | chr25:34714024-34714522 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 13 |
| Conread position: | 139-769 |
| Cow position: | chr25:33298637-33299266 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 17 |
| Conread position: | 139-769 |
| Cow position: | chr25:33298805-33299434 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 17 |
| Conread position: | 139-770 |
| Cow position: | chr25:33299141-33299771 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 139-776 |
| Cow position: | chr25:33298553-33299189 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 139-777 |
| Cow position: | chr25:36800705-36801341 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 17 |
| Conread position: | 139-783 |
| Cow position: | chr25:36801209-36801840 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 140-783 |
| Cow position: | chr25:33298890-33299532 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 16 |
| Conread position: | 144-408 |
| Cow position: | chr25:327002-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 144-646 |
| Cow position: | chr25:23420378-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 151-779 |
| Cow position: | chr25:34713867-34714495 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 151 |
| Conread position: | 152-354 |
| Cow position: | chr25:34433023-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 152-605 |
| Cow position: | chr25:18642169-18641704 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 208 |
| Conread position: | 152-661 |
| Cow position: | chr25:34433526-34434029 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 321 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 245, 79 |
| Conread position: | 152-779 |
| Cow position: | chr25:34769870-34769243 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 152-779 |
| Cow position: | chr25:34770123-34769495 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 153-411 |
| Cow position: | chr25:33127973-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-479 |
| Cow position: | chr25:366728-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 112, 125 |
| Conread position: | 153-572 |
| Cow position: | chr25:33127805-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-621 |
| Cow position: | chr25:33305316-33304853 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 193 |
| Conread position: | 153-646 |
| Cow position: | chr25:34763249-34763739 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 112, 130 |
| Conread position: | 153-742 |
| Cow position: | chr25:34769785-34769196 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 553, 561 |
| Conread position: | 153-742 |
| Cow position: | chr25:36801378-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-758 |
| Cow position: | chr25:33157386-33156782 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 125 |
| Conread position: | 153-765 |
| Cow position: | chr25:33306044-33305438 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 96 |
| Conread position: | 153-769 |
| Cow position: | chr25:33298482-33299098 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 153-770 |
| Cow position: | chr25:36800466-36801083 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 153-774 |
| Cow position: | chr25:25652191-25652813 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 352 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 142 |
| Conread position: | 153-774 |
| Cow position: | chr25:33299238-33299855 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 130 |
| Conread position: | 153-775 |
| Cow position: | chr25:326584-327213 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 112 |
| Conread position: | 153-776 |
| Cow position: | chr25:33306132-33305512 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 153-777 |
| Cow position: | chr25:36800634-36801258 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 153-783 |
| Cow position: | chr25:33298734-33299364 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-783 |
| Cow position: | chr25:33299070-33299700 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 216 |
| Conread position: | 153-784 |
| Cow position: | chr25:23420233-23420849 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 153-784 |
| Cow position: | chr25:34447025-34447656 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 133 |
| Conread position: | 153-784 |
| Cow position: | chr25:34769953-34769322 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-789 |
| Cow position: | chr25:36801138-36801763 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 152 |
| Conread position: | 153-792 |
| Cow position: | chr25:34433608-34434232 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 116 |
| Conread position: | 156-441 |
| Cow position: | chr25:33145104-33145389 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 106, 128 |
| Conread position: | 156-562 |
| Cow position: | chr25:346454-346860 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 109, 122 |
| Conread position: | 156-775 |
| Cow position: | chr25:34732602-34731982 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 136 |
| Conread position: | 156-778 |
| Cow position: | chr25:33157467-33156845 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 156-779 |
| Cow position: | chr25:33305792-33305194 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 68 |
| Conread position: | 157-784 |
| Cow position: | chr25:326504-327137 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 158-776 |
| Cow position: | chr25:36800555-36801173 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 372 |
| Conread position: | 162-776 |
| Cow position: | chr25:33306286-33305680 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 96 |
| Conread position: | 164-649 |
| Cow position: | chr25:33127732-33128217 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-740 |
| Cow position: | chr25:33144863-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 176 |
| Conread position: | 168-730 |
| Cow position: | chr25:23420317-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 117 |
| Conread position: | 168-747 |
| Cow position: | chr25:33127653-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 171-784 |
| Cow position: | chr25:34446875-34447488 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 113 |
| Conread position: | 174-490 |
| Cow position: | chr25:326947-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 174-647 |
| Cow position: | chr25:326353-326826 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 174-779 |
| Cow position: | chr25:34446962-34447567 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 541, 523 |
| Conread position: | 174-784 |
| Cow position: | chr25:34732416-34731806 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 202 |
| Conread position: | 174-784 |
| Cow position: | chr25:34763021-34763625 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 350 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 88, 116 |
| Conread position: | 177-747 |
| Cow position: | chr25:25652300-25652869 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 328 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 178-775 |
| Cow position: | chr25:34713810-34714408 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 200-526 |
| Cow position: | chr25:18642205-18641876 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 201-563 |
| Cow position: | chr25:366689-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 201-767 |
| Cow position: | chr25:33157506-33156940 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 204-434 |
| Cow position: | chr25:34432990-34433220 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-779 |
| Cow position: | chr25:34433495-34434060 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 86 |
| Conread position: | 207-779 |
| Cow position: | chr25:34770151-34769579 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 211-776 |
| Cow position: | chr25:33305423-33304866 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 19 |
| Conread position: | 212-744 |
| Cow position: | chr25:326727-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 336 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 174, 216 |
| Conread position: | 221-766 |
| Cow position: | chr25:34762900-34763442 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 221-770 |
| Cow position: | chr25:36801362-36801911 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 148 |
| Conread position: | 225-769 |
| Cow position: | chr25:33298470-33299014 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 230 |
| Conread position: | 228-777 |
| Cow position: | chr25:34732614-34732064 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 56 |
| Conread position: | 231-779 |
| Cow position: | chr25:33144846-33145391 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 166 |
| Conread position: | 233-525 |
| Cow position: | chr25:414775-414489 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 25 |
| Conread position: | 233-730 |
| Cow position: | chr25:22235828-22236325 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 300 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 278-614 |
| Cow position: | chr25:18642212-18641872 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 292-730 |
| Cow position: | chr25:346422-346860 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 143, 155 |
| Conread position: | 296-784 |
| Cow position: | chr25:34770146-34769658 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-780 |
| Cow position: | chr25:34713845-34714328 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 416 |
| Conread position: | 302-784 |
| Cow position: | chr25:34763230-34763709 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 133, 137 |
| Conread position: | 308-602 |
| Cow position: | chr25:414784-414496 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 308-784 |
| Cow position: | chr25:33127708-33128184 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 309-783 |
| Cow position: | chr25:33298470-33298944 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 311-743 |
| Cow position: | chr25:34732615-34732183 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 315-784 |
| Cow position: | chr25:33144846-33145312 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 315-784 |
| Cow position: | chr25:33157476-33157007 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-784 |
| Cow position: | chr25:22235828-22236295 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 317-787 |
| Cow position: | chr25:36800462-36800933 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 318-647 |
| Cow position: | chr25:366725-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 129 |
| Conread position: | 318-766 |
| Cow position: | chr25:34433020-34433486 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 306 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 206, 324 |
| Conread position: | 318-784 |
| Cow position: | chr25:34762829-34763292 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 280 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 333-776 |
| Cow position: | chr25:33306447-33306009 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 360, 105 |
| Conread position: | 342-776 |
| Cow position: | chr25:326353-326787 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 80, 60 |
| Conread position: | 361-731 |
| Cow position: | chr25:326458-326826 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 368-792 |
| Cow position: | chr25:23420031-23420437 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 136, 24 |
| Conread position: | 372-781 |
| Cow position: | chr25:34433494-34433900 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 277, 113 |
| Conread position: | 381-731 |
| Cow position: | chr25:366704-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 207, 213 |
| Conread position: | 396-775 |
| Cow position: | chr25:34732614-34732234 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 399-792 |
| Cow position: | chr25:36800382-36800769 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 403-776 |
| Cow position: | chr25:33306461-33306097 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 423-748 |
| Cow position: | chr25:346469-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 165, 171 |
| Conread position: | 424-686 |
| Cow position: | chr25:414753-414496 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 431-785 |
| Cow position: | chr25:34433470-34433820 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 342, 23 |
| Conread position: | 432-783 |
| Cow position: | chr25:34713812-34714163 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 213, 197 |
| Conread position: | 447-784 |
| Cow position: | chr25:34770163-34769826 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 448-782 |
| Cow position: | chr25:18642209-18641872 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 465-781 |
| Cow position: | chr25:346427-346743 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 465-781 |
| Cow position: | chr25:366704-367020 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 470-690 |
| Cow position: | chr25:34433004-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 474-783 |
| Cow position: | chr25:33298467-33298776 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 99, 92 |
| Conread position: | 486-754 |
| Cow position: | chr25:22235829-22236097 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-774 |
| Cow position: | chr25:414774-414491 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 280, 22 |
| Conread position: | 486-775 |
| Cow position: | chr25:34732608-34732318 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 118, 138 |
| Conread position: | 504-778 |
| Cow position: | chr25:18641406-18641140 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 505-783 |
| Cow position: | chr25:34713801-34714079 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 168, 172 |
| Conread position: | 510-778 |
| Cow position: | chr25:33157532-33157265 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 510-784 |
| Cow position: | chr25:33127659-33127932 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 553-770 |
| Cow position: | chr25:34433003-34433220 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 571-784 |
| Cow position: | chr25:427330-427543 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 195, 208 |
| Conread position: | 586-784 |
| Cow position: | chr25:34432952-34433150 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 20 |
Show alignments to all cow chromosomes.