Cow genome map

Conread name: Ss1.1-reru03c_m20.5

Conread position: 128-777
Cow position:
Alignm length: 651
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 617, 12

Conread position: 137-770
Cow position:
Alignm length: 636
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 138-672
Cow position:
Alignm length: 536
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 18

Conread position: 138-781
Cow position:
Alignm length: 644
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 138-783
Cow position:
Alignm length: 647
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 18

Conread position: 139-789
Cow position:
Alignm length: 653
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 627, 17

Conread position: 144-457
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 219, 15

Conread position: 145-648
Cow position:
Alignm length: 505
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 7

Conread position: 147-783
Cow position:
Alignm length: 637
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 149-615
Cow position:
Alignm length: 474
Alignm identity: 299
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 5, 149

Conread position: 152-531
Cow position:
Alignm length: 382
Alignm identity: 239
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 138

Conread position: 152-642
Cow position:
Alignm length: 491
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 152-730
Cow position:
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 460

Conread position: 152-757
Cow position:
Alignm length: 608
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 7

Conread position: 152-784
Cow position:
Alignm length: 633
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 152-784
Cow position:
Alignm length: 640
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 39

Conread position: 153-564
Cow position:
Alignm length: 418
Alignm identity: 272
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 89

Conread position: 153-710
Cow position:
Alignm length: 561
Alignm identity: 343
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 38

Conread position: 153-734
Cow position:
Alignm length: 586
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 41

Conread position: 153-770
Cow position:
Alignm length: 618
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-775
Cow position:
Alignm length: 624
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 613, 0

Conread position: 153-775
Cow position:
Alignm length: 627
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 42

Conread position: 153-776
Cow position:
Alignm length: 624
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-777
Cow position:
Alignm length: 626
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 592, 77

Conread position: 153-778
Cow position:
Alignm length: 631
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 30

Conread position: 153-782
Cow position:
Alignm length: 632
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 134

Conread position: 153-783
Cow position:
Alignm length: 632
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 130

Conread position: 153-784
Cow position:
Alignm length: 646
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 41

Conread position: 155-792
Cow position:
Alignm length: 639
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 121

Conread position: 156-776
Cow position:
Alignm length: 623
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 171

Conread position: 157-714
Cow position:
Alignm length: 562
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 130

Conread position: 163-648
Cow position:
Alignm length: 492
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 153

Conread position: 171-791
Cow position:
Alignm length: 623
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 112

Conread position: 172-774
Cow position:
Alignm length: 610
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 7

Conread position: 172-781
Cow position:
Alignm length: 613
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 202-765
Cow position:
Alignm length: 565
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 75

Conread position: 203-783
Cow position:
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 80

Conread position: 203-792
Cow position:
Alignm length: 594
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 74

Conread position: 206-792
Cow position:
Alignm length: 593
Alignm identity: 369
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 73, 36

Conread position: 207-783
Cow position:
Alignm length: 583
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 33

Conread position: 209-771
Cow position:
Alignm length: 567
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 214-792
Cow position:
Alignm length: 582
Alignm identity: 353
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 166, 157

Conread position: 215-784
Cow position:
Alignm length: 575
Alignm identity: 344
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 52

Conread position: 223-774
Cow position:
Alignm length: 556
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 60

Conread position: 228-783
Cow position:
Alignm length: 558
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 148

Conread position: 230-770
Cow position:
Alignm length: 542
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 353

Conread position: 234-625
Cow position:
Alignm length: 395
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 37

Conread position: 240-789
Cow position:
Alignm length: 552
Alignm identity: 328
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 410, 214

Conread position: 289-779
Cow position:
Alignm length: 493
Alignm identity: 302
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 226, 264

Conread position: 300-783
Cow position:
Alignm length: 491
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 191

Conread position: 301-746
Cow position:
Alignm length: 448
Alignm identity: 284
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 68, 76

Conread position: 325-777
Cow position:
Alignm length: 459
Alignm identity: 291
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 55

Conread position: 337-783
Cow position:
Alignm length: 449
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 191

Conread position: 372-789
Cow position:
Alignm length: 423
Alignm identity: 269
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 7, 244

Conread position: 373-755
Cow position:
Alignm length: 387
Alignm identity: 238
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 264, 154

Conread position: 375-792
Cow position:
Alignm length: 422
Alignm identity: 252
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 337, 33

Conread position: 381-778
Cow position:
Alignm length: 403
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 34

Conread position: 409-783
Cow position:
Alignm length: 377
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 206

Conread position: 450-764
Cow position:
Alignm length: 315
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 161, 0

Conread position: 471-776
Cow position:
Alignm length: 307
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 79, 69

Conread position: 485-784
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 116, 126

Conread position: 487-774
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 113, 135

Conread position: 547-779
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.