Cow genome map
| Conread name: | Ss1.1-reru03c_m20.5 |
| Conread position: | 139-777 |
| Cow position: | chr6:49340394-49341031 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 144-749 |
| Cow position: | chr6:49396372-49396976 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 152-784 |
| Cow position: | chr6:49340826-49341456 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 138 |
| Conread position: | 153-606 |
| Cow position: | chr6:49396548-49397001 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 125, 145 |
| Conread position: | 153-671 |
| Cow position: | chr6:49362342-49362848 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 113, 124 |
| Conread position: | 153-778 |
| Cow position: | chr6:49340659-49341284 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 117 |
| Conread position: | 153-784 |
| Cow position: | chr6:49340086-49340702 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 30 |
| Conread position: | 153-784 |
| Cow position: | chr6:49340491-49341122 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 153-784 |
| Cow position: | chr6:49340575-49341206 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 153-784 |
| Cow position: | chr6:49340743-49341374 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 212 |
| Conread position: | 153-784 |
| Cow position: | chr6:49396296-49396927 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 118 |
| Conread position: | 156-779 |
| Cow position: | chr6:49396137-49396754 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 90 |
| Conread position: | 165-785 |
| Cow position: | chr6:49428831-49429451 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 358 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 174-792 |
| Cow position: | chr6:49396233-49396851 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 212-748 |
| Cow position: | chr6:49395692-49396225 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 51 |
| Conread position: | 213-778 |
| Cow position: | chr6:49340385-49340948 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 282-784 |
| Cow position: | chr6:49340368-49340870 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 283-784 |
| Cow position: | chr6:49395681-49396177 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 380-742 |
| Cow position: | chr6:49429130-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 293, 297 |
Show alignments to all cow chromosomes.