Cow genome map

Conread name: Ss1.1-reru03c_m20.5

Conread position: 129-775
Cow position:
Alignm length: 657
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 11

Conread position: 129-779
Cow position:
Alignm length: 661
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 11

Conread position: 131-756
Cow position:
Alignm length: 626
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 131-770
Cow position:
Alignm length: 646
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 25

Conread position: 137-791
Cow position:
Alignm length: 657
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 138-776
Cow position:
Alignm length: 640
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 18

Conread position: 138-778
Cow position:
Alignm length: 649
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 18

Conread position: 138-784
Cow position:
Alignm length: 647
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 138-784
Cow position:
Alignm length: 649
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 138-791
Cow position:
Alignm length: 656
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 18

Conread position: 141-777
Cow position:
Alignm length: 639
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 19

Conread position: 148-775
Cow position:
Alignm length: 632
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 8

Conread position: 151-783
Cow position:
Alignm length: 635
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 97

Conread position: 152-609
Cow position:
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 132

Conread position: 152-651
Cow position:
Alignm length: 500
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 152-654
Cow position:
Alignm length: 507
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 130

Conread position: 152-711
Cow position:
Alignm length: 561
Alignm identity: 342
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 284, 32

Conread position: 152-775
Cow position:
Alignm length: 630
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 152-776
Cow position:
Alignm length: 634
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 7

Conread position: 152-777
Cow position:
Alignm length: 630
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 152-778
Cow position:
Alignm length: 634
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 132

Conread position: 152-781
Cow position:
Alignm length: 633
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 39

Conread position: 152-783
Cow position:
Alignm length: 633
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 292

Conread position: 152-783
Cow position:
Alignm length: 633
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 460

Conread position: 152-784
Cow position:
Alignm length: 633
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-659
Cow position:
Alignm length: 507
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-694
Cow position:
Alignm length: 544
Alignm identity: 330
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 45

Conread position: 153-732
Cow position:
Alignm length: 583
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 149

Conread position: 153-732
Cow position:
Alignm length: 580
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-769
Cow position:
Alignm length: 624
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 51

Conread position: 153-772
Cow position:
Alignm length: 628
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 41

Conread position: 153-776
Cow position:
Alignm length: 625
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 42

Conread position: 153-777
Cow position:
Alignm length: 634
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 36

Conread position: 153-777
Cow position:
Alignm length: 634
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 153-779
Cow position:
Alignm length: 627
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-779
Cow position:
Alignm length: 631
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 117

Conread position: 153-780
Cow position:
Alignm length: 630
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 208

Conread position: 153-781
Cow position:
Alignm length: 635
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 374

Conread position: 153-781
Cow position:
Alignm length: 630
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 378

Conread position: 153-784
Cow position:
Alignm length: 633
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 213

Conread position: 156-695
Cow position:
Alignm length: 554
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 34

Conread position: 156-779
Cow position:
Alignm length: 629
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 129

Conread position: 156-779
Cow position:
Alignm length: 632
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 37

Conread position: 156-779
Cow position:
Alignm length: 631
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 156-784
Cow position:
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 114

Conread position: 156-784
Cow position:
Alignm length: 632
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 122

Conread position: 157-776
Cow position:
Alignm length: 623
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 137

Conread position: 157-784
Cow position:
Alignm length: 630
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 127

Conread position: 159-620
Cow position:
Alignm length: 464
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 163-779
Cow position:
Alignm length: 619
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 194

Conread position: 164-775
Cow position:
Alignm length: 619
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 194

Conread position: 171-775
Cow position:
Alignm length: 608
Alignm identity: 367
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 66, 19

Conread position: 178-784
Cow position:
Alignm length: 608
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 516, 428

Conread position: 204-784
Cow position:
Alignm length: 582
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 412

Conread position: 213-498
Cow position:
Alignm length: 286
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 213-778
Cow position:
Alignm length: 569
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 16

Conread position: 217-775
Cow position:
Alignm length: 565
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 135

Conread position: 217-784
Cow position:
Alignm length: 570
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 66

Conread position: 221-784
Cow position:
Alignm length: 564
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 230-778
Cow position:
Alignm length: 556
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 46

Conread position: 235-779
Cow position:
Alignm length: 545
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 239-779
Cow position:
Alignm length: 546
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 114

Conread position: 296-775
Cow position:
Alignm length: 481
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 12

Conread position: 302-784
Cow position:
Alignm length: 488
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 65

Conread position: 315-779
Cow position:
Alignm length: 470
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 45

Conread position: 319-784
Cow position:
Alignm length: 466
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 320-775
Cow position:
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 417-782
Cow position:
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 113

Conread position: 422-764
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 23

Conread position: 430-775
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 184

Conread position: 478-784
Cow position:
Alignm length: 309
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 137, 147

Conread position: 487-784
Cow position:
Alignm length: 299
Alignm identity: 188
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 116, 16

Conread position: 538-777
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 164, 6

Conread position: 547-784
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 141, 0

Conread position: 567-778
Cow position:
Alignm length: 214
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 40

Conread position: 571-787
Cow position:
Alignm length: 218
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 138

Conread position: 578-779
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 176, 172

Show alignments to all cow chromosomes.