Cow genome map

Conread name: Ss1.1-reru07c_p16.5

Conread position: 119-354
Cow position: chr12:43619514-43619283 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 10

Conread position: 145-362
Cow position: chr12:34878042-34877825 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 36

Conread position: 148-337
Cow position: chr12:4093567-4093752 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 148-377
Cow position: chr12:23714879-23714655 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 67

Conread position: 153-378
Cow position: chr12:33298382-33298161 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 156-370
Cow position: chr12:20404351-20404135 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 41

Conread position: 163-375
Cow position: chr12:8759526-8759309 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 54

Conread position: 164-370
Cow position: chr12:1998611-1998814 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 165-375
Cow position: chr12:36111602-36111811 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 47

Conread position: 165-380
Cow position: chr12:45136790-45136580 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 118, 18

Conread position: 168-366
Cow position: chr12:7657152-7657344 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 171-354
Cow position: chr12:3454882-3454697 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 45

Conread position: 171-354
Cow position: chr12:7539603-7539780 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 43

Conread position: 171-379
Cow position: chr12:31602638-31602844 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 34

Conread position: 171-381
Cow position: chr12:44022601-44022396 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 172-334
Cow position: chr12:14360824-14360665 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 172-335
Cow position: chr12:9055238-9055397 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 172-352
Cow position: chr12:40043191-40043016 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 43

Conread position: 172-354
Cow position: chr12:38126341-38126521 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 172-359
Cow position: chr12:43427619-43427804 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 172-360
Cow position: chr12:39735484-39735667 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 42

Conread position: 172-375
Cow position: chr12:29195477-29195277 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 172-377
Cow position: chr12:6958400-6958199 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 131, 41

Conread position: 172-378
Cow position: chr12:3526582-3526379 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 172-378
Cow position: chr12:6187928-6188135 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 41

Conread position: 172-378
Cow position: chr12:30803799-30804002 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 10

Conread position: 172-378
Cow position: chr12:42160377-42160580 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 172-378
Cow position: chr12:43474938-43474739 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 172-380
Cow position: chr12:4182107-4182310 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 42

Conread position: 173-334
Cow position: chr12:18575953-18576114 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 42

Conread position: 173-352
Cow position: chr12:41684686-41684512 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 42

Conread position: 173-354
Cow position: chr12:9482122-9482302 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 110, 40

Conread position: 173-359
Cow position: chr12:11857457-11857645 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 173-375
Cow position: chr12:38691738-38691939 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 174-351
Cow position: chr12:13988553-13988375 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 39

Conread position: 174-353
Cow position: chr12:15050448-15050619 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 174-381
Cow position: chr12:9866582-9866788 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 176-340
Cow position: chr12:40910108-40910268 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 176-348
Cow position: chr12:13995618-13995789 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 76, 17

Conread position: 176-352
Cow position: chr12:12699460-12699636 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 38

Conread position: 176-360
Cow position: chr12:20356634-20356813 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 180, 37

Conread position: 176-377
Cow position: chr12:35240926-35241125 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 176-378
Cow position: chr12:11860878-11860678 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 135
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 0

Conread position: 176-378
Cow position: chr12:37480659-37480856 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 21, 42

Conread position: 176-378
Cow position: chr12:41989501-41989706 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 40

Conread position: 177-378
Cow position: chr12:34532897-34533095 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 192, 16

Conread position: 180-378
Cow position: chr12:38774072-38774264 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 181-349
Cow position: chr12:8143641-8143802 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 181-378
Cow position: chr12:26357196-26357392 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 18

Conread position: 182-378
Cow position: chr12:19261365-19261174 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 122, 11

Conread position: 183-316
Cow position: chr12:24482417-24482285 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 183-325
Cow position: chr12:6719560-6719419 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 34

Conread position: 183-332
Cow position: chr12:26670237-26670088 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 34

Conread position: 183-333
Cow position: chr12:41316938-41317089 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 36

Conread position: 183-341
Cow position: chr12:25819532-25819685 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 183-341
Cow position: chr12:37420333-37420490 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 183-353
Cow position: chr12:41776266-41776101 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 149, 30

Conread position: 183-354
Cow position: chr12:18561709-18561539 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 31

Conread position: 183-354
Cow position: chr12:26868645-26868811 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 29

Conread position: 183-370
Cow position: chr12:28699608-28699793 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 32

Conread position: 183-370
Cow position: chr12:31237789-31237974 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 183-376
Cow position: chr12:28131760-28131570 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 10

Conread position: 184-342
Cow position: chr12:25343952-25343796 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 15, 0

Conread position: 184-366
Cow position: chr12:25280334-25280511 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 0

Conread position: 184-378
Cow position: chr12:27563210-27563398 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 184-378
Cow position: chr12:29731479-29731293 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 186-378
Cow position: chr12:29057557-29057368 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 187-344
Cow position: chr12:37945780-37945935 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 187-354
Cow position: chr12:4954988-4954830 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 27

Conread position: 187-354
Cow position: chr12:6427065-6426899 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 26

Conread position: 187-370
Cow position: chr12:27176804-27176627 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 187-370
Cow position: chr12:27192200-27192377 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 187-375
Cow position: chr12:10895389-10895573 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 175, 6

Conread position: 187-377
Cow position: chr12:15496064-15495879 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 27

Conread position: 187-378
Cow position: chr12:26217660-26217845 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 27

Conread position: 188-349
Cow position: chr12:4109211-4109051 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 188-351
Cow position: chr12:40200860-40200703 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 5, 0

Conread position: 188-360
Cow position: chr12:39339874-39339708 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 188-378
Cow position: chr12:31948277-31948094 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 157, 23

Conread position: 189-339
Cow position: chr12:39738133-39738281 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 189-341
Cow position: chr12:16493191-16493342 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 24

Conread position: 189-341
Cow position: chr12:27663826-27663977 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 189-342
Cow position: chr12:11268974-11268822 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 28

Conread position: 189-342
Cow position: chr12:32808452-32808598 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 189-348
Cow position: chr12:42282675-42282827 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 189-353
Cow position: chr12:42951527-42951684 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 189-360
Cow position: chr12:7147874-7147703 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 24

Conread position: 189-360
Cow position: chr12:38215862-38216030 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 24, 0

Conread position: 189-369
Cow position: chr12:18413347-18413516 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 24, 0

Conread position: 189-369
Cow position: chr12:41218503-41218682 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 24

Conread position: 189-377
Cow position: chr12:9065724-9065535 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 25

Conread position: 189-377
Cow position: chr12:31530462-31530276 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 189-378
Cow position: chr12:6206498-6206310 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 24

Conread position: 189-378
Cow position: chr12:10942458-10942266 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 92, 24

Conread position: 189-378
Cow position: chr12:22048088-22047903 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 189-378
Cow position: chr12:30936851-30937036 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 189-378
Cow position: chr12:34333280-34333089 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 24

Conread position: 189-378
Cow position: chr12:38343715-38343529 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 189-379
Cow position: chr12:9866064-9866257 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 76, 24

Conread position: 189-380
Cow position: chr12:42492389-42492578 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 71, 24

Conread position: 189-405
Cow position: chr12:35469286-35469497 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 25

Conread position: 190-341
Cow position: chr12:7888101-7887951 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 190-377
Cow position: chr12:25456584-25456388 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 23

Conread position: 190-378
Cow position: chr12:9710042-9710229 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 0

Conread position: 190-378
Cow position: chr12:38851860-38852046 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 20

Conread position: 190-378
Cow position: chr12:42602074-42602264 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 23

Conread position: 191-370
Cow position: chr12:44602668-44602493 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 22

Conread position: 193-339
Cow position: chr12:37718608-37718753 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 193-339
Cow position: chr12:37742461-37742316 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 193-348
Cow position: chr12:29966265-29966111 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 193-352
Cow position: chr12:14396631-14396780 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 193-352
Cow position: chr12:24532462-24532620 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 193-352
Cow position: chr12:41420699-41420861 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 70, 20

Conread position: 193-359
Cow position: chr12:23446876-23446718 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 193-369
Cow position: chr12:38220399-38220224 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 104, 20

Conread position: 193-377
Cow position: chr12:30946906-30946723 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 193-378
Cow position: chr12:3057249-3057066 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 193-378
Cow position: chr12:7110368-7110176 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 20

Conread position: 193-378
Cow position: chr12:7884520-7884702 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 20, 0

Conread position: 193-378
Cow position: chr12:10827946-10827764 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 193-378
Cow position: chr12:14223143-14222960 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 20

Conread position: 193-378
Cow position: chr12:26749790-26749973 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 193-378
Cow position: chr12:29899260-29899444 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 193-378
Cow position: chr12:31269319-31269133 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 26

Conread position: 193-378
Cow position: chr12:33976363-33976178 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 18

Conread position: 193-378
Cow position: chr12:36790653-36790833 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 193-380
Cow position: chr12:4769079-4768903 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 193-380
Cow position: chr12:24397005-24397186 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 194-360
Cow position: chr12:13643394-13643229 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 194-376
Cow position: chr12:43855049-43854875 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 194-378
Cow position: chr12:20355382-20355194 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 17

Conread position: 195-316
Cow position: chr12:25193199-25193079 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 195-333
Cow position: chr12:39320548-39320412 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 195-334
Cow position: chr12:25299519-25299382 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 195-352
Cow position: chr12:30042886-30042730 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 195-354
Cow position: chr12:16105670-16105511 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 140, 16

Conread position: 195-354
Cow position: chr12:22752790-22752628 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 18

Conread position: 195-354
Cow position: chr12:38031985-38032137 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 195-359
Cow position: chr12:39149891-39150054 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 195-359
Cow position: chr12:43974450-43974287 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 195-360
Cow position: chr12:37123810-37123647 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 195-370
Cow position: chr12:46714535-46714358 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 22

Conread position: 195-377
Cow position: chr12:4720102-4719927 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 195-377
Cow position: chr12:12637027-12637203 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 195-377
Cow position: chr12:35137079-35136897 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 173, 18

Conread position: 195-377
Cow position: chr12:35310524-35310705 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 92, 18

Conread position: 195-378
Cow position: chr12:16386298-16386478 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 195-378
Cow position: chr12:18040447-18040629 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 195-378
Cow position: chr12:18103459-18103633 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 195-378
Cow position: chr12:35368802-35368621 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 195-378
Cow position: chr12:42923953-42924134 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 195-378
Cow position: chr12:43789184-43789004 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 18

Conread position: 196-355
Cow position: chr12:40157871-40158021 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 0

Conread position: 196-369
Cow position: chr12:45152449-45152280 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 0

Conread position: 196-378
Cow position: chr12:5635295-5635474 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 196-378
Cow position: chr12:11587926-11587753 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 196-378
Cow position: chr12:26147011-26147191 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 17

Conread position: 197-378
Cow position: chr12:10363068-10363249 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 92, 14

Conread position: 199-377
Cow position: chr12:3472841-3473018 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 0

Conread position: 199-380
Cow position: chr12:42434583-42434763 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 200-370
Cow position: chr12:31926008-31925839 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 201-324
Cow position: chr12:29289939-29289818 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 96, 12

Conread position: 201-376
Cow position: chr12:22485965-22485787 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 43, 16

Conread position: 201-376
Cow position: chr12:31841722-31841550 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 0

Conread position: 201-378
Cow position: chr12:4512299-4512471 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 12

Conread position: 201-378
Cow position: chr12:18939027-18938847 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 12

Conread position: 201-378
Cow position: chr12:21780316-21780141 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 201-378
Cow position: chr12:23939371-23939202 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 201-378
Cow position: chr12:38154916-38155092 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 202-377
Cow position: chr12:5459403-5459229 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 202-378
Cow position: chr12:42180977-42181150 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 203-359
Cow position: chr12:42967145-42966993 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 203-370
Cow position: chr12:15389220-15389058 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 8

Conread position: 203-378
Cow position: chr12:26356558-26356732 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 204-341
Cow position: chr12:10833983-10834117 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 204-350
Cow position: chr12:36241238-36241379 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 204-354
Cow position: chr12:38552342-38552197 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 204-359
Cow position: chr12:41220864-41221011 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 204-378
Cow position: chr12:29674990-29675163 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 204-378
Cow position: chr12:42944286-42944113 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 205-355
Cow position: chr12:42749591-42749439 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 8

Conread position: 205-378
Cow position: chr12:17270685-17270513 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 212-378
Cow position: chr12:12532349-12532512 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 0

Conread position: 216-378
Cow position: chr12:9514506-9514340 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 217-370
Cow position: chr12:16056718-16056871 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 217-378
Cow position: chr12:40360824-40360666 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 102

Conread position: 220-379
Cow position: chr12:11106444-11106603 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 226-354
Cow position: chr12:35124020-35123892 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 226-378
Cow position: chr12:4866942-4866796 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 228-378
Cow position: chr12:30661823-30661971 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 230-353
Cow position: chr12:41159714-41159591 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.