Cow genome map

Conread name: Ss1.1-reru07c_p16.5

Conread position: 160-359
Cow position: chr26:19459943-19459746 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 33

Conread position: 166-378
Cow position: chr26:4854784-4854579 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 167-316
Cow position: chr26:26919777-26919629 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 171-378
Cow position: chr26:10764449-10764246 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 171-378
Cow position: chr26:12807068-12807266 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 41

Conread position: 171-378
Cow position: chr26:21418213-21418418 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 19, 45

Conread position: 172-360
Cow position: chr26:5407213-5407031 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 172-360
Cow position: chr26:23112275-23112086 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 11

Conread position: 172-367
Cow position: chr26:16797732-16797922 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 172-369
Cow position: chr26:27768502-27768310 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 172-370
Cow position: chr26:3930295-3930492 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 172-377
Cow position: chr26:23141868-23142069 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 172-377
Cow position: chr26:32834337-32834544 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 42

Conread position: 172-379
Cow position: chr26:5833172-5832969 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 173-377
Cow position: chr26:33293766-33293970 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 41

Conread position: 176-350
Cow position: chr26:19146135-19145961 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 37

Conread position: 176-378
Cow position: chr26:11538768-11538566 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 12, 38

Conread position: 176-378
Cow position: chr26:12028001-12028203 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 39

Conread position: 181-354
Cow position: chr26:12992576-12992402 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 10, 33

Conread position: 182-352
Cow position: chr26:6037194-6037373 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 33

Conread position: 182-360
Cow position: chr26:99194-99017 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 182-378
Cow position: chr26:7148075-7148271 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 35

Conread position: 183-370
Cow position: chr26:28444667-28444853 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 183-376
Cow position: chr26:8811700-8811508 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 31

Conread position: 183-376
Cow position: chr26:32981247-32981438 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 183-378
Cow position: chr26:586649-586845 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 10

Conread position: 183-378
Cow position: chr26:22892222-22892411 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 31

Conread position: 183-378
Cow position: chr26:23623820-23624010 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 183-378
Cow position: chr26:32601580-32601384 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 30

Conread position: 183-378
Cow position: chr26:32830310-32830115 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 32

Conread position: 187-314
Cow position: chr26:6741526-6741652 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 187-354
Cow position: chr26:11672521-11672355 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 187-354
Cow position: chr26:11967906-11968078 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 83

Conread position: 187-378
Cow position: chr26:34114485-34114296 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 188-338
Cow position: chr26:23096973-23097120 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 188-378
Cow position: chr26:35358800-35358990 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 189-341
Cow position: chr26:16550206-16550059 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 189-341
Cow position: chr26:35530468-35530317 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 25

Conread position: 189-344
Cow position: chr26:34335962-34335808 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 25

Conread position: 189-359
Cow position: chr26:16166474-16166642 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 25

Conread position: 189-359
Cow position: chr26:16857785-16857616 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 23

Conread position: 189-359
Cow position: chr26:27717441-27717609 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 189-363
Cow position: chr26:25663330-25663503 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 189-377
Cow position: chr26:28202536-28202724 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 7, 30

Conread position: 189-378
Cow position: chr26:4643915-4644103 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 23

Conread position: 189-378
Cow position: chr26:7642354-7642539 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 25

Conread position: 190-341
Cow position: chr26:18679464-18679321 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 190-352
Cow position: chr26:8896371-8896532 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 23

Conread position: 190-378
Cow position: chr26:6714081-6714268 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 192-378
Cow position: chr26:12940623-12940434 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 79, 21

Conread position: 193-311
Cow position: chr26:15908546-15908663 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 193-316
Cow position: chr26:16423808-16423688 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 193-341
Cow position: chr26:35678063-35677912 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 24

Conread position: 193-348
Cow position: chr26:25029751-25029597 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 193-350
Cow position: chr26:5749726-5749876 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 193-353
Cow position: chr26:2701770-2701927 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 193-354
Cow position: chr26:33253102-33253258 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 193-375
Cow position: chr26:34060550-34060370 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 193-376
Cow position: chr26:20291478-20291656 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 193-377
Cow position: chr26:5413681-5413869 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 79, 20

Conread position: 193-378
Cow position: chr26:25526462-25526283 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 19

Conread position: 193-378
Cow position: chr26:31633946-31633762 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 193-378
Cow position: chr26:33038011-33038189 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 193-382
Cow position: chr26:1041217-1041029 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 195-336
Cow position: chr26:1894169-1894304 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 195-346
Cow position: chr26:33475912-33475760 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 133, 23

Conread position: 195-353
Cow position: chr26:21822835-21822986 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 195-353
Cow position: chr26:31173485-31173328 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 195-354
Cow position: chr26:28621-28773 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 195-354
Cow position: chr26:4807770-4807612 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 195-354
Cow position: chr26:14293362-14293208 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 18

Conread position: 195-359
Cow position: chr26:31711852-31712015 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 195-375
Cow position: chr26:34026821-34027000 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 195-377
Cow position: chr26:34661059-34660885 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 195-378
Cow position: chr26:218244-218424 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 195-378
Cow position: chr26:830026-829839 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 18

Conread position: 195-378
Cow position: chr26:8478666-8478838 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 195-378
Cow position: chr26:9099321-9099498 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 195-378
Cow position: chr26:15132853-15132671 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 18

Conread position: 195-379
Cow position: chr26:9662016-9662195 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 196-354
Cow position: chr26:16796001-16796152 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 196-378
Cow position: chr26:6823371-6823193 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 196-378
Cow position: chr26:8811342-8811161 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 196-378
Cow position: chr26:12893218-12893393 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 17

Conread position: 196-378
Cow position: chr26:19671689-19671512 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 196-378
Cow position: chr26:23481040-23481217 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 196-380
Cow position: chr26:29900849-29901029 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 17

Conread position: 199-341
Cow position: chr26:33728431-33728573 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 18

Conread position: 199-359
Cow position: chr26:27482354-27482513 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 199-376
Cow position: chr26:34581022-34580839 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 64, 14

Conread position: 199-378
Cow position: chr26:28202760-28202936 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 199-378
Cow position: chr26:33096346-33096524 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 200-359
Cow position: chr26:25225522-25225680 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 202-378
Cow position: chr26:32655402-32655573 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 11

Conread position: 203-354
Cow position: chr26:16801190-16801038 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 10

Conread position: 203-378
Cow position: chr26:28244036-28243863 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 204-355
Cow position: chr26:26926976-26927125 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 12

Conread position: 204-359
Cow position: chr26:9501913-9501761 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 204-369
Cow position: chr26:14174507-14174343 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 206-378
Cow position: chr26:24240886-24240714 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 21

Conread position: 214-378
Cow position: chr26:3559011-3559175 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 219-378
Cow position: chr26:27847213-27847054 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.